Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00548 ATGATGATAAACCGAGGATTGTTCGGGTGGTCCCCACCGCACGTGCAACCGTTAACGCCGGTATCGGAAGTTTCCGAGCCACCGGAATCGCCGTCGCCATATGCAGACCCTAACGGTGAAGTTTCGGCGACACAAACGGTGGAGGAGGAGGAAATGGAGGAGGAAGAGGAAATGGAGCCGCCTCCATCTGCGGTTCCGTTTTCGAAGCTTTTCACGTGTGCTGATCGGTTTGATTGGTTTCTTATGGCGGTTGGTTCGGTTGCTGCTGCGGCGCATGGTACTGCGCTTGTTGTTTATTTGCATTATTTTGCTAAGATTATTCATGTGTTAGCAATGGATGATCGGCAGGTGAATTCGCAGGAACGGTTTGATCGGTTTGCTGAGCTTGCTTTAACCATTGTTTACATTGCAGCAGGAGTTTTTGCTGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACTGGAGAACGACAAACTGCTGTCATCAGGTCCAAATATGTTCAAGTACTACTAAATCAGGATATGAGTTTTTTCGATACTTATGGGAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTTATCCAGTCTGCTCTTAGCGAAAAAGTTGGAAATTATATTCATAATATGGCTACATTCTTCAGTGGCCTTGTCATTGGCCTTATCAATTGTTGGCAGATTGCTTTGTTAACATTAGCAACAGGTCCTTTTATTGTTGCTGCAGGAGGAATATCAAATATATTCCTCCATAGACTTGCAGAGAATATCCAAGATGCATATGCTGAAGCAGCTAGCATGGCTGAACAGGCAATCTCCTATGTAAGGACAATGTATGCATTTACAAATGAAACGGTTGCCAAGTACTCATATGCAACATCACTGCAAGCTACTCTTAGATATGGCATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTCACGTATGGACTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGACTCTTGGTTATTCACGGAAAAGCACACGGTGGTGAAATTGTAACAGCTCTTTTTGCTGTAATTCTAAGTGGCCTGGGATTGAATCAAGCAGCAACAAATTTCTACTCCTTTGAACAAGGGCGGATAGCTGCTTATAGATTATATGAGATGATAAGCCGATCATCCTCATCTGTTAGCCATGATGGCACTTCCCCTGACTCCGTGCAAGGAAATATAGTGTTTCGGAATGTTTATTTCAGCTATCTGTCTCGTCCTGAAATTCCTATCTTGAGTGGATTTTATCTCACTGTACCTTGTAAGAAAACTGTAGCACTTGTTGGCCGAAATGGCTCTGGGAAAAGTAGTATTATTCCACTCATGGAGCGTTTTTATGATCCCACATTAGGAGAAGTTCTTTTAGATGGTGAAAACATAAAGAATTTGAATTTGGAATGGCTGAGGAGCCAAATAGGACTAGTTACCCAGGAGCCTGCTTTGCTCAGTTTGAGTATAAAAGATAACATTGCTTATGGGAGGGATGTCACCATGGATCAAATCGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATCAGCTCATTAGAGGAAGGTTATGACACACAGGTTGGCAGGGCAGGTCTAGCTTTGACCGAAGAGCAGAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCGATTCTTCTACTTGATGAAGTCACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAGGAGGCTCTGGATCTGCTTATGTTGGGACGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTCATAAAAAATGCTGATTATATAGCTGTTATGGATGAGGGTCTACTCGTTGAAATGGGTACTCATGACGAATTGTCGAACCTAAATGGCTTATATGCAGAGCTTCTACGATGTGAAGAGGCAGCAAAACTTCCCAAGAGAATGCCTGCTCGAAACTTTAAGGAGACTGCAGCATTTCAAATTGAGAAGGATTCTTCTGCAAGCCATAGCTTCAATGAACCACCATTCCCCAGAATGACGAAGTCACCCTCTCTTCAAAGAATTTCTAATGTATCTCATTCGCGGCCTTCAGATGTCATCTTTAACTTTCAAGAATCACCTAACGTCGAGAGCCCACCACCTGAGAAGTTGCTGCAAAATGGTCAGGCTTTGGATGCAGATGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAAATGAGACTGCCGGAGTTACCCAAGGTTGATATACAGTCTGTACATCGTCAAATATCAAATGGTTCTGACCCAGAATCCCCCATTTCACCACTTTTAATATCTGATCCTAAAAATGAACGTTCCCATTCACAGACTTTCAGTAGACCACATAGTCATTCTGATGATGCTTCAGTTACAATGAGAGAAGACAGGGAACCACAGAAGCGGAAACCACCATCACTTGGGAAGTTGGTCGAGCTTAGTTTTGCCGAGTGGCTTTATGCTGTGTTAGGAAGCATTGGTGCTGCTGCCTTTGGTTCATTCAATCCCCTTCTTGCTTATGTTATTGGCCTTGTGGTGGCAGCTTACTATAGTATTGATGATCAACATCACTTAGAACAGGAGGTAGAAAAGTGGTGCTTGATCATTGGCTGCATGGGTATTGTAACAGTTATTGCCAACTTTTTGCAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACAGAAAGAGTTAGAAGAATGATGTTCTCAGCCATGCTACGGAATGAAGTAGGATGGTTTGATGACGAGGAAAACAGTGCTGACAATTTATCCATGAGATTGGCCAACGATGCTACTTTTGTACGAGCTGCTTTTAGCAATCGACTTTCCATATTTATACAGGATGGTGCTGCAGTTATTGTTGGCCTTCTCATTGGTGCTGTGCTGCACTGGCGGTTAGCACTGGTGGCTTTTGCAACCCTTCCAGTTCTTTGTATTTCTGCAGTTGCCCAGAAATTGTGGCTAGCTGGATTTTCAAGGGGCATACAGGAAATGCACCGAAAAGCATCTTTGGTTCTTGAAGATGCAGTTAGAAATATATACACTGTTGTTGCATTTTGTGCTGGCAACAAGGTAATGGAGCTCTATAGGCTGCAGCTAAAAAAAATATTTAAGCAGAGCTTTCTTCATGGAATGGCAATTGGTTTTGCATTCGGCTTTTCACAATTTCTACTTTTCGCTTGTAATGCCCTTCTACTTTGGTACACTGCAATATGTATTAAAAATGGTTACGTAAATCCATCCACTGCACTGAGGGAGTACATGGTTTTCTCATTTGCTACATTTGCCCTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTGAAACGGAGAAAATCCCTCATATCAGTGTTTGACATTATAGACCGTGAGCCTAAAATTGATCCTGATGACAACACGGCATTGAAGCCACCCAATGTATATGGAAGCATCGAGTTAAAAAATATTGATTTTAGTTACCCATCTCGTCCTGAAGTGTTGGTATTGAGCAATTTTAGTCTCAAAGTGAATGGGGGCCAAACGGTTGCTGTTGTTGGAGTTTCAGGATCAGGAAAGAGCACTATCATATCTTTAATAGAGAGATTTTATGATCCAGTTGCCGGACAAGTTTTACTGGATGGGAGGGATTTAAAGCTCTATAACTTGAGATGGTTAAGGAGCCACCTCGGTTTGATTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATTATATATGCAAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCAGCGAGAATAGCAAATGCACATCATTTTATTAGCAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACCCCAGGACAGAAACAGAGAGTTGCAATTGCAAGGGTAGTGCTGAAAAATGCACCAATCTTATTGTTGGATGAAGCAAGTTCATCAATTGAATCCGAGTCAAGCCGAGTGATACAAGAAGCTCTAGATACACTAGTGATGGGAAACAAGACCACTGTTTTAATAGCGCATAGAGCTGCAATGATGAGGCACGTGGACAATATTGTAGTGCTTAATGGAGGACGGATAGTGGAGGAGGGAAGTCATGATTCGTTGGTGGCAAAAAATGGTCTGTATGTCCGGTTGATGCAACCTCATTTTGGCAAGGCTATTCGTCAACATCGGCTTGTATAG 4215 0.4237 MMINRGLFGWSPPHVQPLTPVSEVSEPPESPSPYADPNGEVSATQTVEEEEMEEEEEMEPPPSAVPFSKLFTCADRFDWFLMAVGSVAAAAHGTALVVYLHYFAKIIHVLAMDDRQVNSQERFDRFAELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALLTLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASMAEQAISYVRTMYAFTNETVAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRLLVIHGKAHGGEIVTALFAVILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSSSSVSHDGTSPDSVQGNIVFRNVYFSYLSRPEIPILSGFYLTVPCKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLNLEWLRSQIGLVTQEPALLSLSIKDNIAYGRDVTMDQIEEAAKIAHAHTFISSLEEGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMDEGLLVEMGTHDELSNLNGLYAELLRCEEAAKLPKRMPARNFKETAAFQIEKDSSASHSFNEPPFPRMTKSPSLQRISNVSHSRPSDVIFNFQESPNVESPPPEKLLQNGQALDADDKEPSIRRQDSFEMRLPELPKVDIQSVHRQISNGSDPESPISPLLISDPKNERSHSQTFSRPHSHSDDASVTMREDREPQKRKPPSLGKLVELSFAEWLYAVLGSIGAAAFGSFNPLLAYVIGLVVAAYYSIDDQHHLEQEVEKWCLIIGCMGIVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDGAAVIVGLLIGAVLHWRLALVAFATLPVLCISAVAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKNGYVNPSTALREYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDREPKIDPDDNTALKPPNVYGSIELKNIDFSYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNLRWLRSHLGLIQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRVAIARVVLKNAPILLLDEASSSIESESSRVIQEALDTLVMGNKTTVLIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKAIRQHRLV 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00548 1404 MobiDBLite consensus disorder prediction 14 63 - -
Mepo3g00548 1404 CDD ABC_6TM_Pgp_ABCB1_D1_like 82 381 - -
Mepo3g00548 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1144 1391 IPR027417 -
Mepo3g00548 1404 Gene3D ABC transporter type 1, transmembrane domain 69 650 IPR036640 GO:0005524|GO:0016020
Mepo3g00548 1404 MobiDBLite consensus disorder prediction 667 694 - -
Mepo3g00548 1404 Pfam ABC transporter 427 571 IPR003439 GO:0005524
Mepo3g00548 1404 MobiDBLite consensus disorder prediction 46 60 - -
Mepo3g00548 1404 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1155 1392 IPR003439 GO:0005524
Mepo3g00548 1404 CDD ABC_6TM_Pgp_ABCB1_D2_like 827 1138 - -
Mepo3g00548 1404 MobiDBLite consensus disorder prediction 707 733 - -
Mepo3g00548 1404 FunFam ABC transporter B family member 20 69 406 - -
Mepo3g00548 1404 FunFam ABC transporter B family member 20 396 643 - -
Mepo3g00548 1404 Gene3D - 1153 1392 IPR027417 -
Mepo3g00548 1404 SMART AAA_5 1182 1369 IPR003593 GO:0016887
Mepo3g00548 1404 SMART AAA_5 433 618 IPR003593 GO:0016887
Mepo3g00548 1404 FunFam ABC transporter B family member 6 772 1000 - -
Mepo3g00548 1404 MobiDBLite consensus disorder prediction 784 815 - -
Mepo3g00548 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 640 IPR027417 -
Mepo3g00548 1404 SUPERFAMILY ABC transporter transmembrane region 70 381 IPR036640 GO:0005524|GO:0016020
Mepo3g00548 1404 Pfam ABC transporter transmembrane region 839 1099 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g00548 1404 Pfam ABC transporter transmembrane region 85 356 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g00548 1404 FunFam ABC transporter B family member 6 1002 1152 - -
Mepo3g00548 1404 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 83 373 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g00548 1404 PANTHER ABC TRANSPORTER B FAMILY 44 842 IPR039421 -
Mepo3g00548 1404 Coils Coil 252 272 - -
Mepo3g00548 1404 Pfam ABC transporter 1173 1321 IPR003439 GO:0005524
Mepo3g00548 1404 Gene3D - 396 643 IPR027417 -
Mepo3g00548 1404 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 406 641 IPR003439 GO:0005524
Mepo3g00548 1404 SUPERFAMILY ABC transporter transmembrane region 819 1140 IPR036640 GO:0005524|GO:0016020
Mepo3g00548 1404 FunFam ABC transporter B family member 20 1145 1394 - -
Mepo3g00548 1404 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 832 1124 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g00548 1404 MobiDBLite consensus disorder prediction 758 815 - -
Mepo3g00548 1404 Gene3D ABC transporter type 1, transmembrane domain 1006 1152 IPR036640 GO:0005524|GO:0016020
Mepo3g00548 1404 Gene3D ABC transporter type 1, transmembrane domain 774 1002 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00548 Mepo-Chr3 7782452 7795202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00548 55 697 Calmodulin-binding Proteins AT2G36910 43.472 4.11e-166 531