Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00545 ATGGTGGGTAACGACGATGCTCGAGCTCCATGTCACCTTTCAAATTCCCGGAAAATGTTTTGGCGTTCAGCTTCATGGTCTTCCGCCCGTTCCGCCGCCGCTGCAAATCCCACCGGTGAACCGGAATCGAATTTCACCGATCCGAATTCCGCCGGTGGTGTTGGAGATAATACTAACCGGAGATTTCCTCCACCGCCTTTGACACCAAGGTCACAGCAGAATTGTAAGGCAAGATCATCATGTCTGCCGCCCCTTCAGCCGCTTTCGATTGCTCGCCGGAGTTTGGATGAGTGGCCGAAAGCGAGTTCCGACGATATCGGGGAGTGGCCACAACCACCTATTACACCTGGTGGGAGAGGTAATGGTAATGGTAATAGCAGTGGTAGTAGTAATAGTAGTAATAATAATGGTGAAAGGTTGAAACTTGATTTGTCTACAATTCAGCAGAATAATAATCCTGATAGTAGAAATAATGGTGGACTTGTGAAGAGAGATAAAATTGCTTTTTTTGATAAAGAATGTTCTAAAGTTGCTGAACATGTTTATCTTGGTGGTGATGCTGTTGCTAGAGATAGAGAGATTTTGAAAAGGAATGGGATTACTCATGTTTTGAATTGTGTTGGTTTTGTGTGTCCTGAGTATTTTAAAAGTGATTTTGTGTATAGGACTTTGTGGTTACAAGATAGTCCTAGTGAGGATATTACTAGTATATTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAAAAGAGTGGGAGGGTGTTTGTTCATTGTTGTCAAGGGGTGTCGAGGTCGACGTCTCTTGTTATTGCTTATCTTATGTGGAGGGAAGGGCAGAGTTTTGATGATGCTTTTCAGTTTGTGAAGGCGGCGAGGGGTATTGCTGATCCGAATATGGGTTTCGCTTGTCAGTTGTTGCAGTGTCAGAAAAGGGTTCATGCATTTCCGCTTAGTCCGAGCTCGTTGTTGAGAATGTATAGGATTGCTCCTCACTCGCCGTATGATCCTTTGCATCTTGTTCCGAAGATGTTGACGGATCCGTCTATATCTGCTTTGGATTCTAGGGGTGCGTTTATTGTGCACATTCCTTCGGCGATATATGTTTGGATTGGTAAGTATTGTGTGGCTATCATGGAAAGGGATGCTAGAGGGGCTGCGGATCAGATTGTCCGGTATGAGAGAGTGCAAGGATCGATTATCATGATTAAGGAAGGTGAGGAACCACGTTCGTTTTGGGATGCTTTTTCAAAGTTTTTGCCTTTGATGGACATGTCTGGGAGTAGAGTAGAAAGTTGCAAATCAAGTGTTAGAATTTTTCCTGGTGAGAGGAAAGTGGATGCGTTCGATGTTGATTTTGAAGTTTTCAGAAAAGCCATTGTGGGAGGTTTTGTGCCTCCGTTTGCATCATCGGAGAATGATCATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTATTTTAAGGCGGAAAAATTCCTGTCCTGATGTGAAGGAGTTTCTCTCAGCCCCTAAGTTATCATTACCGAGGGTTTATTCAGATTCCATGTTGTGCATTCATACATCTGCAAATTCATTTCCATCACCGTCAATGTTGTCAACTGACTCATCTTTATCATCTTCCTCTTCACCTCCTTTTGTTTCTCCAGATTCCGTTTCTTCTGATTCTAGCAATCACTCAAAGTTGTTGTTAGAATTATCCCCAGATTCTTCCTCTCTCGTTTTTACTCCTGTCCCAGTATCTTCATCTTTGTCTAGCTTCTCTAATTTGTCCCTCTTGTCAAATTATAGTTCTCAACCAGTGTCTAACTGTACAGATATCCATGGTGTCAAGTTATCGCCACATCTATGTTCTCGATCTGCCTCTTTACCATTGAAAAAACCATCAACTTCCATTGCTGAACGCAGAGGTAGTTTATCGAAGTCTTTGAAGTTGCCTCTCATGAATGATAACACAAAAGTAATAGATAAACCATCAACTATTCCTTCCAGTCGGGAACATGGTGTTCTTGCTAACAGCAACTTTAGCTGTGTGCAAGATTCAGACAGTATAGATTATTTGTTCGAGTCCACCGCTAATGTCAAAAATGGAGGTACAAATTCAATTCAACAGTGTGAACCAGTATCGTGTCCTGACATTGCTGATAGTGTGGGCTGCAATGAACCATCAGTTCTCAGGAATTTTGTTGAATCCTCAGTATATAGTTTATCTGGAGAAGATTTGAAGTCTGCATCATCAAAGGGAGATTACGAGAGTGGCTCGTCGCATTGTAGTAAGATACAAAGTTTAGTATATCGCTGGCCAAGTTTAGAAAAAATTGAGGCATTTGGTGCAAATCATTTGGGTTCAGAGGCTGCTTTTGTTGTATTCTCTCCAAGCATACATATGCATGCAAGAAACATTTTGTATATTTGGATAGGGAGTTCTCTCAAACTGGATGCTTCGCAGGTTCGGTTAGACAGTGATAGACGGTCTGATTTGATTGGGGCAGTTGACTGGAACAAAATTGGTTGTGATCTTCTTGCTCAGTTTAATTTGCCGCACAATACAGTCACTAAGATTGTTAAAGAGAATGAAGAACCGCAAGAGTTCCTTGCTCTACTGAGTTCATTGTAG 2619 0.4204 MVGNDDARAPCHLSNSRKMFWRSASWSSARSAAAANPTGEPESNFTDPNSAGGVGDNTNRRFPPPPLTPRSQQNCKARSSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPITPGGRGNGNGNSSGSSNSSNNNGERLKLDLSTIQQNNNPDSRNNGGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDREILKRNGITHVLNCVGFVCPEYFKSDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKSGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSISALDSRGAFIVHIPSAIYVWIGKYCVAIMERDARGAADQIVRYERVQGSIIMIKEGEEPRSFWDAFSKFLPLMDMSGSRVESCKSSVRIFPGERKVDAFDVDFEVFRKAIVGGFVPPFASSENDHETHLPARESSWSILRRKNSCPDVKEFLSAPKLSLPRVYSDSMLCIHTSANSFPSPSMLSTDSSLSSSSSPPFVSPDSVSSDSSNHSKLLLELSPDSSSLVFTPVPVSSSLSSFSNLSLLSNYSSQPVSNCTDIHGVKLSPHLCSRSASLPLKKPSTSIAERRGSLSKSLKLPLMNDNTKVIDKPSTIPSSREHGVLANSNFSCVQDSDSIDYLFESTANVKNGGTNSIQQCEPVSCPDIADSVGCNEPSVLRNFVESSVYSLSGEDLKSASSKGDYESGSSHCSKIQSLVYRWPSLEKIEAFGANHLGSEAAFVVFSPSIHMHARNILYIWIGSSLKLDASQVRLDSDRRSDLIGAVDWNKIGCDLLAQFNLPHNTVTKIVKENEEPQEFLALLSSL 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00545 872 CDD DSP 174 308 - -
Mepo3g00545 872 MobiDBLite consensus disorder prediction 534 554 - -
Mepo3g00545 872 SMART VILL_6 322 419 IPR007122 GO:0051015
Mepo3g00545 872 Gene3D Protein tyrosine phosphatase superfamily 147 315 IPR029021 -
Mepo3g00545 872 SMART dsp_5 173 312 IPR020422 GO:0006470|GO:0008138
Mepo3g00545 872 MobiDBLite consensus disorder prediction 96 138 - -
Mepo3g00545 872 MobiDBLite consensus disorder prediction 24 56 - -
Mepo3g00545 872 ProSitePatterns Tyrosine specific protein phosphatases active site. 257 267 IPR016130 GO:0016311|GO:0016791
Mepo3g00545 872 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 232 293 IPR000387 GO:0016311|GO:0016791
Mepo3g00545 872 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 168 314 IPR029021 -
Mepo3g00545 872 Gene3D Severin 324 420 IPR029006 -
Mepo3g00545 872 MobiDBLite consensus disorder prediction 118 138 - -
Mepo3g00545 872 MobiDBLite consensus disorder prediction 24 83 - -
Mepo3g00545 872 SUPERFAMILY Actin depolymerizing proteins 320 426 - -
Mepo3g00545 872 Pfam Dual specificity phosphatase, catalytic domain 181 311 IPR000340 GO:0008138|GO:0016311
Mepo3g00545 872 ProSiteProfiles Dual specificity protein phosphatase domain profile. 173 315 IPR020422 GO:0006470|GO:0008138
Mepo3g00545 872 PANTHER MKPA PROTEIN 11 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00545 Mepo-Chr3 7740097 7745795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00545 1 209 Protein tyrosine phosphatase (PTP) family AT3G55270 55.869 9.52e-62 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00545 - - vum:124838930 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00545 3 7740097 7745795 Mepo3g00545 3 7740097 7745795 ECH