Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00538 ATGGCATCCAAATCCTTTAGCATCTCTGCCACTTCAAAAGATGAAGGTGATTCTTCCCACACAAAAGAAGAGGTGAACATGAAGGATAATGGAGATCAACCCTCAAAATCAAATTCCAGCAAGTCTGTCGGTTCGGTAAAGCTATCGAAAGATGATGTTGTTAGCCCTGTTGAAGTTGGTTCAACATCTTCTTTTCCTAATAACAACAATGAAGGGAAAGACAAGGAGAAGAATGAAGAGAAGAAGTATTTTACATGCTCGTATTGCAAAGGGCAATTTTCTACTTTCCAAGGTTTAGGAGGGCATCAAAATGCTCATAAGGCGGAACGTGCATTGGAAAAACAACGTAAAGAAAGGTATGATGGTGGTGCTTTAGGTTTTGGGCCATATCACTTTAAACCCTATTTCAATTATTCTAGTACTCTTTTTACACCTTATAATAATTATAGGGGCCTTGGTGTTAGAATGGAGTCAACAATTCAAAAACCACCTTATACTAACCCTAGGTTTATCCCAAATGGTTCTGGTAGTTTGCGTTTGAATCAGATGTTACACCCTTCACTTTTTAACTTCAGAAATAATATTGAAGCTAGTAATACTGGAGTTGGAACTCTAGGTTTTGGTGGAGCTAGTACTTCAAGAATTGAAGATGGTACAAAAAATAAAATTGGTGCTATTTTAAAACTTGGGGATTCTTCTATTGCTACTAGTTCAAACTCAAACACAGAGAAGAAAAATGTTGTGGCTACTACTTCTTCAATGGATGATGATACTGATCATGATTCAAAGTCAAACATTGAAGAAGAACCCTCTGATTCGGATTCTTCTGGACTCGACTTAACACTCAGGCTTTAG 855 0.3731 MASKSFSISATSKDEGDSSHTKEEVNMKDNGDQPSKSNSSKSVGSVKLSKDDVVSPVEVGSTSSFPNNNNEGKDKEKNEEKKYFTCSYCKGQFSTFQGLGGHQNAHKAERALEKQRKERYDGGALGFGPYHFKPYFNYSSTLFTPYNNYRGLGVRMESTIQKPPYTNPRFIPNGSGSLRLNQMLHPSLFNFRNNIEASNTGVGTLGFGGASTSRIEDGTKNKIGAILKLGDSSIATSSNSNTEKKNVVATTSSMDDDTDHDSKSNIEEEPSDSDSSGLDLTLRL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00538 284 MobiDBLite consensus disorder prediction 31 46 - -
Mepo3g00538 284 MobiDBLite consensus disorder prediction 254 270 - -
Mepo3g00538 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Mepo3g00538 284 MobiDBLite consensus disorder prediction 234 253 - -
Mepo3g00538 284 Gene3D Classic Zinc Finger 63 122 - -
Mepo3g00538 284 MobiDBLite consensus disorder prediction 15 30 - -
Mepo3g00538 284 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 3 284 IPR044246 GO:0009788
Mepo3g00538 284 MobiDBLite consensus disorder prediction 1 77 - -
Mepo3g00538 284 MobiDBLite consensus disorder prediction 234 284 - -
Mepo3g00538 284 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Mepo3g00538 284 Pfam C2H2-type zinc finger 83 108 - -
Mepo3g00538 284 SUPERFAMILY beta-beta-alpha zinc fingers 80 112 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00538 Mepo-Chr3 7654750 7655604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00538 80 162 C2H2 Transcription Factor Family AT5G25160 45.238 7.73e-15 70.5