Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00516 ATGGCTGGGAAGGTGGCGAAGGCAGCTTACGACGCAAAGATGGGGAAGCTTCTTCGAGAGTACACACAAGTTTTGGTGGTTTCATCAGACAATGTTGGATCAAACCAGCTTCAGGGTATAAGGAGAGCACTGCACGAAGATTCAGTGGTTGTGATGGGGAAGAACTCATTGATGAAACGCTCTATTATCCAAGCAGCAGAGAAAACTGGAAACAGCCATGCCTTCCTTAACCTCGTTCCACTCCTTGTGGGGAACGTTGCTTTGATTTTTACCAAAGGTGACTTGAGGGATGTTAGTGAACGGATTGCTAAGCTCAAGGTTGTTAATCCTATTCTCATGTGCCCAAAGTACATGTCATATGACTCGTACAAAACTTGTTCCTACATGCAATCCGGACAGTTGCCGCTGGGCCTTACATGTTGTAACCAACAATCTTCACAAGCTTCCGAGCCTTTTCTTGTAAGCTCAAAATTCTCGCCGCCCCAGCACTGTTACATGATGAGATCGAGACAGTTCTTGTTGACAAGTATATGGTCTCCTTTTCTCCTTTTGGCTGGTAATTTGTGA 567 0.4533 MAGKVAKAAYDAKMGKLLREYTQVLVVSSDNVGSNQLQGIRRALHEDSVVVMGKNSLMKRSIIQAAEKTGNSHAFLNLVPLLVGNVALIFTKGDLRDVSERIAKLKVVNPILMCPKYMSYDSYKTCSYMQSGQLPLGLTCCNQQSSQASEPFLVSSKFSPPQHCYMMRSRQFLLTSIWSPFLLLAGNL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00516 188 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 5 140 - -
Mepo3g00516 188 Pfam Ribosomal protein L10 6 104 IPR001790 -
Mepo3g00516 188 SUPERFAMILY Ribosomal protein L10-like 7 108 IPR043141 -
Mepo3g00516 188 Gene3D - 3 126 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00516 Mepo-Chr3 7391225 7393721 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00516 1 110 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 61.404 1.63e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00516 K02941 - jre:108980032 140.584