Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00513 ATGGATTTTTCTGTGTTGAAATCTCAGTTTCATCATTTTCGAACCACCGCGAATTCGTTTCTCTCTCAATACGAACCTCTCACTCTTCTTCTTGTTCCTCTCTTCTCTCTGGTTCTCGCTAGCGCGGTTCGTTCGTTTTTTGGAGTTATTCATGATAAAGGACTCAAAGCTACTCTTCTAGGGTTCTTCATGAACTTCATCAAATTGATCCCTGGTGTGAAGAGTTACATAGATGCTGAAAAACAGAAGGTTGTGGATAAGTTGCAGTCTGATGGTAAATCTAAGAGGGATGGTTGGAAGACAGAGTTGCCAAGCATGGGATCGGGGACATCCGTCCTTGAGAAAATGAGAGAGGAAAAAAGAAATGATGCAGTTTGGCAAGGCAAATGCTCTGGTACAGTTTACATTGGAGGAGATGAGTCTGGTGGGCATTTTTCTGTCATAAATGAGGCTTGCTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTCCAGAGTGTTGTACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCGGCACTTCTTGGCAGTAAAGAAAAGACATCTGGAGGACAAATATGTGGCAACATGACATCAGGAGGGACTGAAAGTATATTATTAGCTGTTAAATCATCTCGTGACTATATGAAATCCAAGAAAGGAATTACAAAACCTGAAATGATAATTCCCGAGTCTGGTCACTCAGCATATGACAAAGCTGCACAGTATTTTAACATCAAACTATGGCGTGTTCCAGTTGACAAAAATTTCCAAGCTGATGTGAAAGCAACTCGACGTTACATTAACAAAAATACCATTATGTTAGTCGGATCTTCTCCTGGGTTTCCTCATGGGATAATAGACCCCATCAAAGAACTTGGTCAACTAGCATCAAACTTTGGCATTTGTTTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGGTACCCCATTCAACCTTATGATTTTACTGTTAAAGGGGTTACTTCAATATCAGTGGATGTGCATAAATATGGGTTGGCTCCCAAAGGAACGAGTGTAGTTTTATATAGGAACCATGAAATCAGAAAGCATCAATTCGTTGCAGTTACTGAGTGGTCCGGTGGGTTGTATGTATCTCCAACCATAGCTGGAAGCAGACCTGGAAGCCTTATTGCTGGTGCATGGGCGGCAATGATATCTCTAGGGAAAGAAGGTTACTTGGAAAATACAAAAGCAATTATGGAAGGATCAAAAAGACTACAAAAAGGCATAGAGGAGATTCCCGAGTTGTTTGTCATTGGAAGACCCGATATGACAATCGTGGCTTTTGGATCAAATGTTTTGGATATATTTGAAGTGAATGATATCATGTCATCCAAAGGTTGGCATTTGAATGCATTGCAGAGACCCAACAGCATCCATATCTGTGTGACACTGCAGCATGTACCAGTTATTGACGACTTTCTAAGGGATTTAAAGGAATCTGTGAAAACTGTGAAAGAAAATCCTGGTCCAATAACTGGAGGATTAGCACCTATATATGGCGCCGCTGGGAAGATGCCAGATAGAGGAATGGTCCAGGAATTGTTGGTTGATTTTATGGATGGCACATGCTAG 1626 0.4151 MDFSVLKSQFHHFRTTANSFLSQYEPLTLLLVPLFSLVLASAVRSFFGVIHDKGLKATLLGFFMNFIKLIPGVKSYIDAEKQKVVDKLQSDGKSKRDGWKTELPSMGSGTSVLEKMREEKRNDAVWQGKCSGTVYIGGDESGGHFSVINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTAALLGSKEKTSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITKPEMIIPESGHSAYDKAAQYFNIKLWRVPVDKNFQADVKATRRYINKNTIMLVGSSPGFPHGIIDPIKELGQLASNFGICFHVDLCLGGFVLPFARELGYPIQPYDFTVKGVTSISVDVHKYGLAPKGTSVVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLIAGAWAAMISLGKEGYLENTKAIMEGSKRLQKGIEEIPELFVIGRPDMTIVAFGSNVLDIFEVNDIMSSKGWHLNALQRPNSIHICVTLQHVPVIDDFLRDLKESVKTVKENPGPITGGLAPIYGAAGKMPDRGMVQELLVDFMDGTC 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00513 541 PANTHER - 41 541 - -
Mepo3g00513 541 Pfam Pyridoxal-dependent decarboxylase conserved domain 168 446 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mepo3g00513 541 Gene3D Aspartate Aminotransferase, domain 1 109 504 IPR015422 GO:0003824
Mepo3g00513 541 FunFam Sphingosine-1-phosphate lyase 1 392 504 - -
Mepo3g00513 541 Gene3D - 138 405 IPR015421 GO:0003824
Mepo3g00513 541 SUPERFAMILY PLP-dependent transferases 124 504 IPR015424 -
Mepo3g00513 541 FunFam sphingosine-1-phosphate lyase 1 141 405 - -
Mepo3g00513 541 Gene3D - 102 538 - -
Mepo3g00513 541 FunFam Sphingosine-1-phosphate lyase 1 501 540 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00513 157 499 Calmodulin-binding Proteins AT5G17330 25.556 4.64e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00513 K01634 - gmx:100794395 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00513 3 7330761 7340860 Mepo3g00513 3 7330761 7340860 ECH