Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00505 ATGAAAACTTTTCACTTGACACTTTTCACAACATTTCTGATCTCACTTACCAGTTTCCTAACTTGTTTTGCAAACAACGACGTAACGGTTCAGTTAAACGACGATGTTCTCGGTTTAATTGTGTTCAAATCAGATCTCCATGACCCTTCATCTTACCTTTCTTCATGGAATGAAGATGACATCAATCCATGTTCATGGCAATATGTGAAATGCAATCCACAAACTCAAAGAGTCTCAGAACTTTCCTTAGATGGTTTAGGCTTATCAGGTAAATTAGGAAGAAGTCTTGAAAAATTGCAACATTTAGTAACATTATCACTTTCACACAATAATTTGAGTGGAACTATTAGTCCTTCACTCACACTTTCCAACACTCTTCAAAAACTAAACCTTAGTCACAACTCATTTTCTGGTCCATTACCTCTTTCTTTTGTCAACATGAGTTCAATAAGGTTCATTGATCTCTCGCATAATTCATTCGCGGGACAAATACCTGATAGTTTCTTCGAGAATTGTTTTTCTCTTCGTCGTGTCTCTTTATCGATGAATTTATTTGAAGGACAAATTCCTACCACACTCTCTAAATGTTCTTTGTTGAATAGTGTTGATCTTTCAAATAATCATTTTAGTGGTAATGTTGATTTTTCTAGTGTTTGGTCATTGAATAGGCTTAGAAGCTTGGATCTATCCAACAATGCTTTATCTGGAAACTTGGTTAGTGGAATTTCATCATTACATACCTTGAAAGAGTTACTGTTACAGAATAATCAGTTTTCAGGTCAATTACCAAATGATATTGGATTTTGTATTCATTTGAATAGGGTTGATTTAAGTACTAATCAGTTTAGTGGTGAGTTACCTGAATCATTTGGGAGATTAAGCTCTTTAAGCTATTTAAGGGTTTCAAATAATCTTTTATTTGGTGAATTTCCTCATTGGATTGGTACCTTGATTAGTTTGGAGAATTTGGACTTATCTCATAATCAATTCTATGGAAACATTCCATTGTCATTGGTTTCATGCACAAAGTTATCTAAGATTTTTCTTAGAGGGAATAGTTTCAATGGTACTATACCTGAGAGCTTGTTTGGATTAGGATTAGAGGAAATTGATTTTTCTCATAATGAATTGATAGGTTCAATTCCAGCTGGATCAAACAGATTATTAGAAACTCTTACAAAGTTGGATCTTTCGGTTAATCATCTACAAGGGAATATTCCTGCAGAAATTGGTCTGCTTTCAAAGTTGAGATTCTTGAATTTATCTTGGAATGATCTTCATTCTCAGATTCCACCTGAATTTGGTCTTCTGCAGAATCTTGAAGTTTTGGATCTTCGTAATAGCGCGTTGTTTGGTTCGATTCCAGAAGATACATGTGATTCAGGCAATTTGGCTGTTCTTCAATTGGATGGAAATTCATTGAAGGGATCTATTCCTGAAAAGATTGGGAATTGTTCATCTCTTTACTTGTTGGGTTTGTCACACAATAACTTGACTGGTCCAGTCCCAAAAACAATGTCAAATCTAAACAAGCTCAAAATCCTGAAGTTGGAATTCAATGAGCTAAGTGGAGAGCTACCAATGGAGCTAGGAAAGCTTCAAAATCTTCTTGCTGTGAATATATCACATAACAGCCTTACAGGAAGGCTTCCAGTTGGTAGCATATTTCAAAACTTGGACAAAAGTTCTTTGGAAGGAAACTATGGTCTTTGTTCACCCTTGTTGACAGGTCCATGCAAAATGAATGTACCAAAACCTCTAGTACTTGATCCACATGGCTATAACGATCAAATGAATCCTCGAATCCCAAGAAATGAATCATCTGAGTCTAGTAGTCCAATTCATCACCACAGGTTCCTTAGTATTTCAGCTATTATAGCAATTTCAGCTTCTATTGTCATTGTAATAGGAGTGATAGCTATTAGTCTAGTTAATGCTTCTGTAAGGAGAAAGCTAGCATTTGTGGAAAATGCTTTGGAAAGTATGTGTTCAAGCTCTTCTAGATCAGGAGCACCGGCAACAGGAAAACTTATTCTATTTGATTCTCAATCTTCACCGGATTGGATCAGCAATCCAGAAAACTTGCTCAACAAGGCGTCTGAAATCGGTGAAGGAGTGTTTGGAACAGTTTTCAAAGTTCCATTAGGATCACAACAAGGAAGAAATGTTGCAATCAAGAAACTTATCACATCAAACATACTTCAATATCCAGAAGACTTCGACAGGGAAGTTAGAATTCTAGGCAATGCCCGACATCCAAATTTGATAGCGTTGAAAGGATACTATTGGACTCCTCAACTACAGCTTTTAGTATCTGAATTTGCACCAAATGGTAACTTGCAATCCAAGTTACATGAAAAGCTTCCTTCAAGTCCACCACTCTCTTGGCCTAATAGATTCAAGATTTTACTGGGAACAGCAAAGGGACTTGCACATTTGCATCATTCATTCAGGCCACCAATAATACACTACAACATAAAACCAAGCAACATCTTACTTGACGAAAACTTCAACGCAAAGATATCAGATTTCGGGTTAGCTAGGCTATTAACAAAGCTAGACAAGCATGTGATGAGTAACAGATTTCAAAGTGCACTAGGTTATGTAGCACCTGAATTAGCTTGTCAGAGCTTAAGGGTCAATGAGAAATGTGATGTGTATGGTTTTGGTGTGATGATACTTGAGATAGTGACAGGTAGGAGGCCAGTGGAGTATGGCGAAGATAATGTGTTGATATTGAATGATCATGTGAGGGTTTTGCTTGAACATGGTAATGCTTTGGAGTGTGTTGATCCAAGTTTGATGAACGAATATCCCGAGGATGAGGTTTTACCTGTTTTGAAGTTGGCTATGGTATGTACATCTCAAATTCCATCTAGTAGGCCTACTATGGCAGAAGTTGTGCAAATCTTGCAGGTCATTAAAACTCCTGTTCCTCAAAGGATGGAAGTATTTTGA 2958 0.3671 MKTFHLTLFTTFLISLTSFLTCFANNDVTVQLNDDVLGLIVFKSDLHDPSSYLSSWNEDDINPCSWQYVKCNPQTQRVSELSLDGLGLSGKLGRSLEKLQHLVTLSLSHNNLSGTISPSLTLSNTLQKLNLSHNSFSGPLPLSFVNMSSIRFIDLSHNSFAGQIPDSFFENCFSLRRVSLSMNLFEGQIPTTLSKCSLLNSVDLSNNHFSGNVDFSSVWSLNRLRSLDLSNNALSGNLVSGISSLHTLKELLLQNNQFSGQLPNDIGFCIHLNRVDLSTNQFSGELPESFGRLSSLSYLRVSNNLLFGEFPHWIGTLISLENLDLSHNQFYGNIPLSLVSCTKLSKIFLRGNSFNGTIPESLFGLGLEEIDFSHNELIGSIPAGSNRLLETLTKLDLSVNHLQGNIPAEIGLLSKLRFLNLSWNDLHSQIPPEFGLLQNLEVLDLRNSALFGSIPEDTCDSGNLAVLQLDGNSLKGSIPEKIGNCSSLYLLGLSHNNLTGPVPKTMSNLNKLKILKLEFNELSGELPMELGKLQNLLAVNISHNSLTGRLPVGSIFQNLDKSSLEGNYGLCSPLLTGPCKMNVPKPLVLDPHGYNDQMNPRIPRNESSESSSPIHHHRFLSISAIIAISASIVIVIGVIAISLVNASVRRKLAFVENALESMCSSSSRSGAPATGKLILFDSQSSPDWISNPENLLNKASEIGEGVFGTVFKVPLGSQQGRNVAIKKLITSNILQYPEDFDREVRILGNARHPNLIALKGYYWTPQLQLLVSEFAPNGNLQSKLHEKLPSSPPLSWPNRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENFNAKISDFGLARLLTKLDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILEIVTGRRPVEYGEDNVLILNDHVRVLLEHGNALECVDPSLMNEYPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00505 985 ProSiteProfiles Leucine-rich repeat profile. 101 123 IPR001611 GO:0005515
Mepo3g00505 985 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Mepo3g00505 985 ProSitePatterns Protein kinases ATP-binding region signature. 702 727 IPR017441 GO:0005524
Mepo3g00505 985 FunFam Leucine-rich repeat receptor-like protein kinase 32 190 - -
Mepo3g00505 985 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 775 980 - -
Mepo3g00505 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 217 972 - -
Mepo3g00505 985 FunFam Inactive leucine-rich repeat receptor-like protein kinase 311 582 - -
Mepo3g00505 985 ProSiteProfiles Protein kinase domain profile. 696 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00505 985 Gene3D Ribonuclease Inhibitor 33 191 IPR032675 -
Mepo3g00505 985 Gene3D Ribonuclease Inhibitor 310 585 IPR032675 -
Mepo3g00505 985 Gene3D Phosphorylase Kinase; domain 1 682 774 - -
Mepo3g00505 985 PRINTS Leucine-rich repeat signature 224 237 - -
Mepo3g00505 985 PRINTS Leucine-rich repeat signature 317 330 - -
Mepo3g00505 985 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 191 287 - -
Mepo3g00505 985 SUPERFAMILY L domain-like 48 382 - -
Mepo3g00505 985 SUPERFAMILY L domain-like 367 574 - -
Mepo3g00505 985 SUPERFAMILY Protein kinase-like (PK-like) 691 975 IPR011009 -
Mepo3g00505 985 Pfam Leucine rich repeat 463 522 IPR001611 GO:0005515
Mepo3g00505 985 Pfam Protein kinase domain 698 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00505 985 Gene3D Transferase(Phosphotransferase) domain 1 775 982 - -
Mepo3g00505 985 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 690 774 - -
Mepo3g00505 985 CDD STKc_IRAK 702 972 - -
Mepo3g00505 985 Gene3D Ribonuclease Inhibitor 192 309 IPR032675 -
Mepo3g00505 985 SMART LRR_typ_2 245 269 IPR003591 -
Mepo3g00505 985 SMART LRR_typ_2 437 461 IPR003591 -
Mepo3g00505 985 SMART LRR_typ_2 147 171 IPR003591 -
Mepo3g00505 985 SMART LRR_typ_2 99 124 IPR003591 -
Mepo3g00505 985 SMART LRR_typ_2 317 341 IPR003591 -
Mepo3g00505 985 SMART LRR_typ_2 413 436 IPR003591 -
Mepo3g00505 985 Pfam Leucine Rich Repeat 415 433 IPR001611 GO:0005515
Mepo3g00505 985 Pfam Leucine Rich Repeat 126 146 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00505 Mepo-Chr3 7208985 7212822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00505 9 982 Receptor kinase-like Gene Family AT3G28040 62.165 0.0 1206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mepo3g00505 Pkinase 3.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00505 - - pvu:PHAVU_008G017400g 1493.02