Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00502 ATGATTCGTGTGTTATCAATTTTATTGCTTACTATAGACCTCATCATCACAATTCTTGAACTATCTTCCTCTCTAGTTTCTTGTGAACAAAAAATAAACATAGTAGAAGAATTATATTTCCATTGGATTGGAATTGGTATTTTGAGTATGATTTCAATGAAGATAATTGCTTTATTAGTAGGGTTAGGGTCTTCATTTTTCAAGCATCCAGGATATGTTGTGGATGGTATTGTGGCTATTGGGGCATTAATTATGGAAGTGTTTTTGGAGAAGAGAGGTGGTGGTTTATTGGTTGTGGTGAGTTTATGGCGTGTGATTAGAGTTGTGGAGAGTGTGTTTGAGTTGAGTGATGAAGCTATTGAAGCTCAAATTGAAGGGATAGTTTGTCAATTTGAGGCACTTAAGGATGAGAATATTAGGCTATTGGGGATTATAAATGAAAAGAACGAGACAATTGAAAAACTCAAGGATGAATTAGATAAGTCAATTTGGTTTGAATTATTGGACAAGGACATTTCAGCCTCACCTAGTTCCCTCGTATTCTCAGCTGCAACTAGGTCTTTTCTTCAAGCTGTTGCAACGGAAGAGGTTGCAACTCCTCTCAGAGTTGTTCAGATGGAAGGATTGGTCATCCTGAAGATAATTAAGCATTGTAAGGATCACTCACCTTCTTTAGTCACTGGACAACTTCTTGGATTGGATGTTGGCAGTGTTCTTGAAGTTACTAACTGCTTCCCTTTTCCGATGAGGGAAGAAGACGAGGAAATTGAAGCTGATGGTGCCAATTACCAGCTTGAAATGATGAGGTGCTTGAGAGAGGTCAATGTGGACAATAATACCGTTGGATGGTACCAGTCTACATTGCTTGGCTCCTATCAAACTGTGGAGTTGATTGAAACCTTTATGAATTACCAGGAGAATATTAGACGCTGTGTTTGCATAATATATGACCCATCAAGGGCTGATCAAGGGGTCCTAGCTCTGAAGGCCTTGAAGCTTTCAGACTCATTCATGGAACTGTATCGCAGCAATAATTTTACTGGCGAGAAATTGAGGGAGAAGAACTTATCATGGGTGGATATCTTCGAGGAAATTCCCATCAAAGTTTCAAATTCTGCCCTCATCAGTGCTTTTATGACAGAGCTGGAACCTGATACTCCAGTTACCCAGTGTGATTTTGATCGTCTGCAATTATCAACCAGTTCACTGATGGAGAGAAATATGGAATTTTTGATTGAATGCATGGATGACTTGTCAATTGAACAACAAAAGTTTCAATTCCATTACCGGAGCTTGTCTCGTCAGCAGGCTCAGCAGCAAGCATGGCTTCAGAAGAGAAGGGCTGATAACATGGCACGCAGAGCTGCCGGGGAAGAGCCTTTACCCGAGGAAGATCCTGCAAACCCCATTTTCAAGCCACTGGCCGAACCATCACGACTTGAGAGTTTCCTCATAACAAATCAAATTTCCAACTATTGCAACCAAATCAATGGGGTTGCTGGGCAAAGCTTTAACAGACTTTATTTGCTGAAGGCTTTGCATGAGGAGGATTAA 1554 0.4048 MIRVLSILLLTIDLIITILELSSSLVSCEQKINIVEELYFHWIGIGILSMISMKIIALLVGLGSSFFKHPGYVVDGIVAIGALIMEVFLEKRGGGLLVVVSLWRVIRVVESVFELSDEAIEAQIEGIVCQFEALKDENIRLLGIINEKNETIEKLKDELDKSIWFELLDKDISASPSSLVFSAATRSFLQAVATEEVATPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELIETFMNYQENIRRCVCIIYDPSRADQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDFDRLQLSTSSLMERNMEFLIECMDDLSIEQQKFQFHYRSLSRQQAQQQAWLQKRRADNMARRAAGEEPLPEEDPANPIFKPLAEPSRLESFLITNQISNYCNQINGVAGQSFNRLYLLKALHEED 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00502 517 Gene3D Cytidine Deaminase, domain 2 177 392 - -
Mepo3g00502 517 MobiDBLite consensus disorder prediction 448 472 - -
Mepo3g00502 517 Pfam C-terminal region of eIF3h 323 515 IPR045810 -
Mepo3g00502 517 SMART pad1_6 203 336 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mepo3g00502 517 CDD MPN_eIF3h 202 465 IPR027524 GO:0003743|GO:0005737|GO:0005852
Mepo3g00502 517 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 199 516 IPR027524 GO:0003743|GO:0005737|GO:0005852
Mepo3g00502 517 FunFam Eukaryotic translation initiation factor 3 subunit H 183 392 - -
Mepo3g00502 517 ProSiteProfiles MPN domain profile. 204 337 IPR037518 -
Mepo3g00502 517 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 202 305 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mepo3g00502 517 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 197 500 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00502 267 515 Eukaryotic Initiation Factors Gene Family AT1G10840 83.936 2.53e-154 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00502 K03247 - gmx:100795273 620.928