Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00490 ATGATCAATATGCTAGTTTTGATATATCTAGCAGGTAAAAGTAAAAAATGCATCGATGGCCTAAGTTTTTTCATGAGATTACGGATAGCAATGGATGCAGCCAAAGGCATACTATATCTGCATACAGAGGCTAACCCTCCTATATACCACAGAGATATTAAAGCCACCAACATACTCCTAGACTCAAAGTTTACAGCTAAAGTGGCTGATTTTGGATTGTCACGACTTGCACCATACTCGGATGAAGAGGGAAATGTACCTAAGTATGTGTCAACAGTTGTGAAGGGAACACCGGGTTACCTGGACCCAGAATATATGATGACTCATATCTTAACTGATAAAAGTGATGTATACAGCCTAGGAATTGTGTTTTTAGAGCTTTTGACCGGCATGCATGCAATATCACGTGGGAAAAACATTGTTCGTGAGGTTAATCTTGCTTGTCGATCTGGCATAATAGATTCCATTATAGATAACATAATGGGTGAGTATCCATCTGAATGCTCAGACAAGTTCTTAGCTATGGCCCTCAGTTGCTGTCATGACCATCCAGAGGAGAGACCATCAATGTTAGATGTGGTGAGGGAATTGGAAGACATTATTACCTTGGTACCTGAAACTGAAATTAGTTTATCGGATGTTTCTTTTGATAATTCTAGTAAAATGGCACCCTCATCTTCATCATCATCAACAACAACATCAGGAGTGACAAGTTCATATGTGTCAGGAAGTGATCTTGTCAGTGATGTCATTCCTACTTTTGTTCCTCATTGA 774 0.3928 MINMLVLIYLAGKSKKCIDGLSFFMRLRIAMDAAKGILYLHTEANPPIYHRDIKATNILLDSKFTAKVADFGLSRLAPYSDEEGNVPKYVSTVVKGTPGYLDPEYMMTHILTDKSDVYSLGIVFLELLTGMHAISRGKNIVREVNLACRSGIIDSIIDNIMGEYPSECSDKFLAMALSCCHDHPEERPSMLDVVRELEDIITLVPETEISLSDVSFDNSSKMAPSSSSSSTTTSGVTSSYVSGSDLVSDVIPTFVPH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00490 257 MobiDBLite consensus disorder prediction 217 240 - -
Mepo3g00490 257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Mepo3g00490 257 SMART serkin_6 2 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00490 257 SUPERFAMILY Protein kinase-like (PK-like) 20 231 IPR011009 -
Mepo3g00490 257 PANTHER OS01G0750732 PROTEIN 20 224 - -
Mepo3g00490 257 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 9 213 - -
Mepo3g00490 257 Gene3D Transferase(Phosphotransferase) domain 1 9 215 - -
Mepo3g00490 257 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00490 257 Pfam Protein kinase domain 29 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00490 Mepo-Chr3 7032444 7033721 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00490 1 208 Receptor kinase-like Gene Family AT5G01950 62.500 5.68e-82 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mepo3g00490 Pkinase 5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00490 - - ccaj:109788950 359.762