Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00489 ATGTATGCAGTAAAAGCACTGATAGACATCAAAAAGAGTCTGATTGATCCAAGTGACAAACTGAGGAATTGGAATAAGGGTGATCCATGTGCAGAAAACTGGACTGGAGTTAGGTGTTTTGATAAGAAGGGTGATGATGGTTACTTCCATATTCGAGAGCTGAATTTTATGTGGAACAATCTGATAGGCACAATACCAAAGGAAATTGGACATATTACATCATTGATGCTCTTGCTCTTGAGTGGAAATAAATTATCTGGTAGTTTACCAGATGAGCTTGGCAACCTTACAAATTTGAATAGACTCCAAGTAGATGAAAACCAATTGTCTGGTCCTGTGCCAAAATCATTTGCTAACTTGGTCCTTATTCAACACATCCACATGAACAACAACTCATTCAATGGTCAACTTCCATCCGAACTTTCAAATGTATCCAAACTTATTCATTTGCTTTTGGACAACAATAATTTTTCTGGCTATCTTCCACCTGAATTCTCCAAGCTACAGAGTTTGGCAATACTCCATCTTGATAACAATAATTTCAGCGGGAATGGAATTCCGTCCACCTTTGAAAATCTTTCGAGTCTAGTAAAACTGAGTCTAAGAAATTGCAGTCTACAAGGAGCTATTCCGGATTTCAGTTCAATACAAGGACTTACATATTTGGATCTAAGCTGGAATCAGTTCACTGGACCTATACCATCAAAGAAACTTGCCGACAATATGACGACTTTTGATCTCTCCCATAACAAGCTCAATGGATCAATTCCTCATGGTGTAGTATATCCACATCTTCAAAGATTGAAACTAGAGAACAATTTACTATCTGGGTTCGTCCCTACTACCATATGGCAGAACATAACCTTTAGCAAGAAGGCGAAACTTATAATTGATCTTCATAACAACTTGCTTTCTGACATTTTTGGAGATTTGAATCCCCCAGGAAATGTTACCTTAAGGCTTTCTGGCAATCCTGTATGCAAGAAGTCCAACATACAAAGAATTGGTCAATTTTGTGCTCACGAAGGACACGATGTCGATGAATTAGAATTTACAAACTCAACCGGTGTCTGCCGCATTCAATCTTGTCCAGTAGACAATTTCTTTGAATATTCACCCTCATCCCCAGTTCCTTGTTTTTGTGCAGCACCTCTAAGAATAGGATATAGGCTTAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTATATAACTAGATTTGAATCATACATAACTGCGTCCTTAAACCTAAGCCTTTATCAGTTATCAATAGATTCTTATGAATGGGAAAAGGGTCCTCGTCTTAGAATGTATTTAAAGTTTTTTCCTTCATACAACGATTCTGACACATTCAACAAAAGTGAGATTCTTCACATTGGTAGCATCTTTGCGTCATGGGGATTTCGTCGCACAGACTTTTTTGGACCATATGAACTCCTGAATGTCACTCTTCTAGGACCTTATGAAAATATAATTATTAATACAGAGGGTGGAAAAAGAAAAAAAGGCATAAAAGTTGCTATTTTAATAGCAGTTGTTGCTAGTATTTTAGCAATATCTGTAACAATCATTCTCAATCTCCTACTATTTAGAAGAAAGCTGAAATACCGGCACTTGATTTCCAGGAAATGTATGTCCACTGATATATATATCAAGATAGATGGTGTGAAATCATTCACTTTGAAAGAGTTGACTCATGCTACTAACAAGTTTGATATCTCAAATAAAGTTGGTGAAGGAGGTTATGGAAATGTCTATAAGGGCATTCTATATGATGAAACAGTTGTTGCCGTTAAGCGAGCGGGAGAAAATTCATTACAAGGACAAAAAGAGTTCTTAACTGAGATTGAGCTTTTATCAAGGTTACATCATCGAAATCTTGTCTCCCTAATAGGTTACTGTAACGAAGAAGGAGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCTTAAGGGAGTGGATTTCTGGTAAGGAATAA 1980 0.3707 MYAVKALIDIKKSLIDPSDKLRNWNKGDPCAENWTGVRCFDKKGDDGYFHIRELNFMWNNLIGTIPKEIGHITSLMLLLLSGNKLSGSLPDELGNLTNLNRLQVDENQLSGPVPKSFANLVLIQHIHMNNNSFNGQLPSELSNVSKLIHLLLDNNNFSGYLPPEFSKLQSLAILHLDNNNFSGNGIPSTFENLSSLVKLSLRNCSLQGAIPDFSSIQGLTYLDLSWNQFTGPIPSKKLADNMTTFDLSHNKLNGSIPHGVVYPHLQRLKLENNLLSGFVPTTIWQNITFSKKAKLIIDLHNNLLSDIFGDLNPPGNVTLRLSGNPVCKKSNIQRIGQFCAHEGHDVDELEFTNSTGVCRIQSCPVDNFFEYSPSSPVPCFCAAPLRIGYRLKSPSFSYFPPYITRFESYITASLNLSLYQLSIDSYEWEKGPRLRMYLKFFPSYNDSDTFNKSEILHIGSIFASWGFRRTDFFGPYELLNVTLLGPYENIIINTEGGKRKKGIKVAILIAVVASILAISVTIILNLLLFRRKLKYRHLISRKCMSTDIYIKIDGVKSFTLKELTHATNKFDISNKVGEGGYGNVYKGILYDETVVAVKRAGENSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEGEQMLVYEFMPNGTLREWISGKE 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00489 659 Pfam Leucine rich repeat N-terminal domain 4 39 IPR013210 -
Mepo3g00489 659 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
Mepo3g00489 659 Gene3D Phosphorylase Kinase; domain 1 541 645 - -
Mepo3g00489 659 Gene3D Ribonuclease Inhibitor 2 123 IPR032675 -
Mepo3g00489 659 Gene3D Ribonuclease Inhibitor 124 186 IPR032675 -
Mepo3g00489 659 SUPERFAMILY Protein kinase-like (PK-like) 543 658 IPR011009 -
Mepo3g00489 659 Gene3D Ribonuclease Inhibitor 187 364 IPR032675 -
Mepo3g00489 659 FunFam Leucine-rich repeat receptor-like kinase 2 125 - -
Mepo3g00489 659 Pfam Protein tyrosine and serine/threonine kinase 572 656 IPR001245 GO:0004672|GO:0006468
Mepo3g00489 659 PANTHER RECEPTOR-LIKE PROTEIN 55 10 655 - -
Mepo3g00489 659 SUPERFAMILY L domain-like 5 326 - -
Mepo3g00489 659 FunFam Leucine-rich repeat protein kinase family protein 534 645 - -
Mepo3g00489 659 ProSiteProfiles Protein kinase domain profile. 570 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00489 Mepo-Chr3 7027287 7032110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00489 4 658 Receptor kinase-like Gene Family AT5G01950 56.414 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mepo3g00489 PK_Tyr_Ser-Thr 2.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00489 - - gmx:100815005 933.324