LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g00488	ATGTGGGCTCTAAGAATTCATGGATATGCCTTGGCTGTGTCATTTTGTTTCATCACCCTCATGGCAGCCTCACAGAAAACAGATCCTTTAGAAGTAAAAGCACTGAAAGACATCAAAAAGAGTTTGATTGATCCGAGTGACAAACTGAGGAACTGGAATAAGGGTGATCCATGTGCAGCAAACTGGACTGGAGTTCGGTGTTTTGATAAGAAGGGTGATGATGGTTACTTCCATATTCGAGAGCTCTACCTGATGACTTTGAACCTCTCGGGAACTCTAGCACCGCAGCTTGGTCTGCTCTCCCATCTTGTGATAATGAATTTTATGTGGAACAATCTGATAGGCACAATACCAAAGGAAATTGGACATATTACATCATTGATGCTCTTGCTCTTGAGTGGAAATAAATTATCTGGTAGTTTACCAGATGAGCTTGGCAACCTTACAAATTTGAATAGACTCCAAGTAGATGAAAACCAATTGTCTGGTCCTGTGCCAAAATCATTTGCTAACTTGGTCCTTATTAAACACATCCACATGAACAACAACTCATTCAATGGTCAACTTCCATCCGAACTTTCAAATGCATCAAACCTTATTCATTTGCTTTTGGACAGCAATAATTTTTCTGGCTATCTTCCACCTGAATTCTCCAAGCTACAAAATTTGGCAATACTCCAACTTGATAACAATAATTTCAGCGGGAATGGAATTCCGTCCACCTTTGAAAATCTTTCGAGTCTAGTAAAACTGAGTCTAAGAAATTGCAGTCTACAAGGAGCTATTCCGGATTTCAGTTCAATACAAGGACTTACATATTTGGATCTAAGCTGGAATCAGTTCACTGGACCTATACCATCAAAGAAACTTGCCGACAATATGACGACTTTTGATCTCTCCCACAACAAGCTCAATGGATCGATTCCTCGTGGTGTAGTCTATCCACATCTTCAAAGATTGCAACTAGAGGACAACTTACTATCTGGGTTTATCCCTGCTACCATATGGCAGAACATATCCTTCAGCAAGAAGGAGAAACTTATAATTGATCTTCATAACAACTTGCTTTCTGACATTTTTGGAGATTTGAATCCCCCAGGAAATGTTACCTTAAGGCTTTATGGTAATCCTGTATGCAAAAAGTCGAACATACAAAGAATTGATCAATTTTGTGATCACGAAGAACGTGACGTAGATGAATTAGAATTTTCAAACTCAACTGTCTGCCCCATTCACTCTTGTCCAGTAGACAATTTCTTTGAATATTCACCCTCACCCTCATCCTCAGTTCGTTGTTTTTGTGCAGCACCTCTAAGAATAGGATATAGGCTTAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTATATAACCAGTTTTGAATCATACATAACTGCGTCCTTAAACCTAAGCCTTTATCAGTTATCAATAGATTCTTATGAATGGGAAAAGGGTCCTCGTCTTAGAATGTATTTAAAGTTTTTTCCTTCATACAACGATTCTCACACATCATTCAACATAAGTGAGATCATTCACATTGGTAGCATCTTTGCGTCATGGGGATTTCCTCGCACAGACTTTTTTGGACCATATGAACTCCTGAATGTCACTCTTCTAGGACCTTATGCAAATATGATTATTAATACAGAGGGTGGAAACGGAAAAAAAGGCATAAAAGTTGCGATTATAATAGCAGCTGTTGCTAGTATTTTAGCAATATCTGTAATAATCATTCTCAATCTCCTACTTTTTAGAAGAAATCTGAAATACCAGCACTTGATTTCCAGGAAGCGTATGTCCTCTGATATATATATCAAGATAGATGGTGTGAAATCATTCACTTTGAAAGAGTTGACTCATGCTACTAACAAGTTTGATATCTCAACTAAAGTTGGTGAAGGAGGTTATGGAAATGTCTATATGGGCATTTTATCTGATGAAACAGTGGTTGCCATTAAGCGAGCAGGTGAAAATTCATTACAAGGACAAAAAGAGTTCTTAACTGAGATTGAGCTTTTATCAAGGTTACATCATCGAAATCTTGTCTCCCTAATAGGTTACTGTAACGAAGAAGAAGAGCAGATGCTGGTTTATGAATTCATGCCTAATGGCACCTTAAGGGAATGGATTTCTGGTAAAAGTAAAAAATGCAACAACGGCCTAAGTTTTTTCATGAGATTACGGATAGCAATGGATGCAGCCAAAGGCATACTATATCTGCATACAGAGGCTAACCCTCCTGTATACCACAGAGATATTAAAGCCACCAACATACTCCTAGACTCAAAGTTTACAGCTAAAGTGGCTGATTTTGGATTGTCACGACTTGCACCAAACTCAGATGAAGAGGGAAATGTACCTAAGTATGTGTCAACAGTTGTGAAGGGAACACCGGGTTACCTGGACCCAGAATATATGATGACTCATATGTTAACTGATAAAAGTGATGTATACAGCCTAGGAATTGTGTTTTTGGAGCTTTTGACCAGCATGCATGCAATATCACGTGGGAAAAACATTGTCCGTGAGGTTAATTTGGCTTGTCGATCTGGCATAATAGATTCCATTATAGATAACAGAATGGGCGAGTATCCATCTGAATGCTCAGACAAGTTCTTAGCTCTGGCCCTCAGTTGTTGTCATGACCATCCAGAGGAGAGACCGTCAATGGTAGACGTGGTGAGGGAATTGGGAGACATTATTGCCTTGGTACCTGAAACTGAAATTAGTTTATCAGATGTTTCTTTCGATAATTCTGGTAAAATGGCACCCTCATCTTCATCATCATCAACAATAACATCAGGATTCACTATGACAAGAATGGACCAACAAAACATGTTCTCATATGTGTCAGGAAGTGATCTTGTCAGTGATATCAATCCTACTATTGTTCCTCGTTGA	2898	0.3872	MWALRIHGYALAVSFCFITLMAASQKTDPLEVKALKDIKKSLIDPSDKLRNWNKGDPCAANWTGVRCFDKKGDDGYFHIRELYLMTLNLSGTLAPQLGLLSHLVIMNFMWNNLIGTIPKEIGHITSLMLLLLSGNKLSGSLPDELGNLTNLNRLQVDENQLSGPVPKSFANLVLIKHIHMNNNSFNGQLPSELSNASNLIHLLLDSNNFSGYLPPEFSKLQNLAILQLDNNNFSGNGIPSTFENLSSLVKLSLRNCSLQGAIPDFSSIQGLTYLDLSWNQFTGPIPSKKLADNMTTFDLSHNKLNGSIPRGVVYPHLQRLQLEDNLLSGFIPATIWQNISFSKKEKLIIDLHNNLLSDIFGDLNPPGNVTLRLYGNPVCKKSNIQRIDQFCDHEERDVDELEFSNSTVCPIHSCPVDNFFEYSPSPSSSVRCFCAAPLRIGYRLKSPSFSYFPPYITSFESYITASLNLSLYQLSIDSYEWEKGPRLRMYLKFFPSYNDSHTSFNISEIIHIGSIFASWGFPRTDFFGPYELLNVTLLGPYANMIINTEGGNGKKGIKVAIIIAAVASILAISVIIILNLLLFRRNLKYQHLISRKRMSSDIYIKIDGVKSFTLKELTHATNKFDISTKVGEGGYGNVYMGILSDETVVAIKRAGENSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEEEQMLVYEFMPNGTLREWISGKSKKCNNGLSFFMRLRIAMDAAKGILYLHTEANPPVYHRDIKATNILLDSKFTAKVADFGLSRLAPNSDEEGNVPKYVSTVVKGTPGYLDPEYMMTHMLTDKSDVYSLGIVFLELLTSMHAISRGKNIVREVNLACRSGIIDSIIDNRMGEYPSECSDKFLALALSCCHDHPEERPSMVDVVRELGDIIALVPETEISLSDVSFDNSGKMAPSSSSSSTITSGFTMTRMDQQNMFSYVSGSDLVSDINPTIVPR	965

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g00488	965	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g06840	29	190	-	-
	Mepo3g00488	965	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	700	912	-	-
	Mepo3g00488	965	Gene3D	Ribonuclease Inhibitor	192	406	IPR032675	-
	Mepo3g00488	965	FunFam	Leucine-rich repeat protein kinase family protein	588	699	-	-
	Mepo3g00488	965	Pfam	Protein kinase domain	626	894	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00488	965	ProSiteProfiles	Protein kinase domain profile.	624	900	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00488	965	ProSitePatterns	Protein kinases ATP-binding region signature.	630	652	IPR017441	GO:0005524
	Mepo3g00488	965	Gene3D	Transferase(Phosphotransferase) domain 1	700	909	-	-
	Mepo3g00488	965	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	747	759	IPR008271	GO:0004672\|GO:0006468
	Mepo3g00488	965	Gene3D	Phosphorylase Kinase; domain 1	594	699	-	-
	Mepo3g00488	965	PANTHER	RECEPTOR-LIKE PROTEIN 55	38	897	-	-
	Mepo3g00488	965	Gene3D	Ribonuclease Inhibitor	29	191	IPR032675	-
	Mepo3g00488	965	CDD	STKc_IRAK	630	899	-	-
	Mepo3g00488	965	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	214	308	-	-
	Mepo3g00488	965	SUPERFAMILY	Protein kinase-like (PK-like)	609	920	IPR011009	-
	Mepo3g00488	965	Pfam	Leucine rich repeat N-terminal domain	31	67	IPR013210	-
	Mepo3g00488	965	SUPERFAMILY	L domain-like	48	391	-	-
	Mepo3g00488	965	SMART	serkin_6	624	903	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g00488	Mepo-Chr3	7004567	7011450	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g00488	5	907	Receptor kinase-like Gene Family	AT5G01950	59.715	0.0	1071

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Mepo3g00488		Pkinase	1.3e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g00488	-		-	gmx:100815005	1370.14