Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00486 ATGACTCAGGCTGTGCAAGTTTTAAGTCGGCATGGAACTGATTTGGTTGGAGAAGGGAGGGGATCAGATTCGGAGTGTTTGGCTGGTTTTGAATGTTTTCTGAACATTGTGAGAGCTTTGGGAATGGGATCTTGTATATCTGAGGGTAGTGGTGGTGCTGGTGGTTCGCAGTCTCTGCTAACTTATTCGCAGGAATTGAATGTTGACGGTGGGAAGAGAAGGAGGTTAAAGGGTTCGTCTACTATGGATTATAAGGTACCTGGGAGAATGTTCTTAAATGGGTCAAGTGAGATTGCTTCCATGTATTGTAAGCAAGGTAAAAAGGGTATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAGGGCGCCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAAGAAAGTTAGGGATTCATTCCCTTTAAAGCTTAGTGCACAATGGGATTTGCATCGTAAGAATGAAGATGGATTCAATGATCAAAATGGGGCTGCCACAAGTTATAATTCTGAAGAGCAAATTAAACTGATTGACGAGAACATTGATCATGAGCTCGATGGAGCAAATACTATCTTGGCACTAAGAGAATCCTATTTGAAGGCTAGCAAGATTATGGACAAAGAACTGAAAATGCATCGTGATATTGATTGCTTTTGCAGTGGGACTACAGCAGTTACCTTGATCAAGCAGGGGCTGGACCTTGTTATTGGAAATGTGGGGGATTCAAGAGCTGTATTGGGAACCCGAGATCACGAGGATTCTCTTATTGCTGTTCAGTTGACTGTTGACCTTAAGCCTAATCTTCCAAAGGAAGAAGAGAGGATCAGGCATCGTAAAGGAAGGGTGTTTTCCCTTAAGAATGAACCGGATGTGGCTCGGGTTTGGCTGCCTAACTCTGATTTCCCAGGTCTGGCTATGGCACGGGCTTTTGGAGATTTTTGCCTAAAGGATGTTGGATTGATTTCCGTTCCAGATGTCTCATATCACCGCCTTACAGAGAAGGATGAATTTGTTGTGTTAGCAACAGACGGGATTTGGGATGTTTTATCAAATGAAGAAGTTGTGGAGATTGTGGCATCTGCACCGCGGTCTACTGCTGCTAGATTACTGGTCGAGTCAGCTGTTCTTGCTTGGAAGACAAAATTCCCTTTCTGTAAGATTGATGATTGTGCTGCGGTGTGCCTCTTCCTTAATTCAAATACTGAGTTGAATGCAGAACATACCACAGACAAGTTGACACCAGATGCATCAACGGACCCAGTTGTTGATCAATCATCTCTACCTAGCGAAAATGGAATTGGAGTGGAAGCTGAAAAACTGCAGTGA 1359 0.4341 MTQAVQVLSRHGTDLVGEGRGSDSECLAGFECFLNIVRALGMGSCISEGSGGAGGSQSLLTYSQELNVDGGKRRRLKGSSTMDYKVPGRMFLNGSSEIASMYCKQGKKGINQDAMLVWENFCSKEGAIFCGVFDGHGPYGHRVAKKVRDSFPLKLSAQWDLHRKNEDGFNDQNGAATSYNSEEQIKLIDENIDHELDGANTILALRESYLKASKIMDKELKMHRDIDCFCSGTTAVTLIKQGLDLVIGNVGDSRAVLGTRDHEDSLIAVQLTVDLKPNLPKEEERIRHRKGRVFSLKNEPDVARVWLPNSDFPGLAMARAFGDFCLKDVGLISVPDVSYHRLTEKDEFVVLATDGIWDVLSNEEVVEIVASAPRSTAARLLVESAVLAWKTKFPFCKIDDCAAVCLFLNSNTELNAEHTTDKLTPDASTDPVVDQSSLPSENGIGVEAEKLQ 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00486 452 PANTHER PROTEIN PHOSPHATASE 85 406 IPR015655 GO:0004722|GO:0006470
Mepo3g00486 452 SMART PP2C_4 92 406 IPR001932 -
Mepo3g00486 452 Pfam Protein phosphatase 2C 181 375 IPR001932 -
Mepo3g00486 452 Gene3D - 94 416 IPR036457 -
Mepo3g00486 452 ProSiteProfiles PPM-type phosphatase domain profile. 98 408 IPR001932 -
Mepo3g00486 452 CDD PP2Cc 98 408 IPR001932 -
Mepo3g00486 452 SUPERFAMILY PP2C-like 96 410 IPR036457 -
Mepo3g00486 452 MobiDBLite consensus disorder prediction 419 452 - -
Mepo3g00486 452 MobiDBLite consensus disorder prediction 425 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00486 Mepo-Chr3 6962602 6968161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00486 85 408 PP2C-type Phosphatase Gene Family AT1G16220 62.080 9.02e-145 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00486 - - gmx:100810538 703.745