Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00479 ATGGTTCCTTCTCAAAGTAGCAAACAAAATTACAAAACTATAAATGGTGATTATGTTTTCTACAACAACAACTCAACAAGTGCTATGAACCAATTTCAATTTGTTGAAGACTACACCACCTACAATAATTGTTTAAGATCTGAATATTTTGTGAGGCCAATGGCTGAAGAAGAGGAATCATCATCAAGACTCAACACTATCACCACCATCACTCATCACAACGAACTTGAACCCGAACCCGAAGGAGAAACCATTTCAACCTCAAAGGAAGAAGAAGAACAAGAAAGAGAAGCAAACAACAATAACATCAATAACAACAATAACTGGCTTCAATTAAGCATAGGTAATACAGCCGTGACCACAACCACAAAACATGGTTGTGATCATAACCAGACTCCAACAAGTAGTTCAGGCTTGTTGGAGCTTGAGTTATTACCGACAAATTGGGCTGCTTCACGGCCCAATTTGGAGCAACCATCGACCAGAGGTTGCTCAAATTTTAATTCTTCTTTGTTTTTCGAACAAACGACATCTTCCTCATCTTCTTCACCCTTGTCCATATCTATGTCAATGCCAAGTGGTCCAACCTATGGTCATCAACAACAACATCAACATCTAGTACCACATAACTGGGCATTTGGTCCATTACTACCACACTCAATGGCAATTAATATGCCTTCTTCTACATCTTATATTCCATCTTCTTCTTTATCACAATCTTGTTCTTCTTTAAGGCCATCTTTAGGACCTAATTATTATCCTCAATATCATCATGCATCACCCTTTCATTTTCCTTCATCTTCTTCATCTTCTGGATTTGATCAATTTGATGTGGCTGGTCCTAGCTCATCATCTCATGTCGCTTTTCGAGTAGTCGATCCTCCTCGTAGACCTCATTCTGGAATTTGGTTTATGCTACAAGCCTCACAAAATCAATTGAAAGAACCATTCTTGCCACAAATACCTAAGAACTATCTTAGAATCAAAGATGGAAGGATGACAGTTCGGTTGCTATTGAAGTATTTGGTTAGCAAACTCAAACTTGAGAGTGAATCAGAGATAGAGATAACATGCAGAGGACAACAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAATATTTGGACACCAAGGGACACCACAACAAGGCCTTTGCTTTCAGATTCCTCAACAACAGATCATATTGGTGAGATTTCTCGTTTTCTTGTTGATTATTGTATCAACATCATCGATGATGACGATTCTAAGTTTGCATATTTGAAGGTTCTTGAACCCGAATTGAAGAATTGTGACTCAGTTTTTCGATGTCTCTGCGGCGTTGAAATATTCTGTCATACACATAATTCTGGTGAGATTGTGCCGCTATATTTCCAGACTCGCCGCATGAGGCCTTTTGCCTCTTGGTTCTTCGTCGAAAAACAGAAGGAACGAACTACTATTGTTCTCAACAGCTAG 1461 0.3895 MVPSQSSKQNYKTINGDYVFYNNNSTSAMNQFQFVEDYTTYNNCLRSEYFVRPMAEEEESSSRLNTITTITHHNELEPEPEGETISTSKEEEEQEREANNNNINNNNNWLQLSIGNTAVTTTTKHGCDHNQTPTSSSGLLELELLPTNWAASRPNLEQPSTRGCSNFNSSLFFEQTTSSSSSSPLSISMSMPSGPTYGHQQQHQHLVPHNWAFGPLLPHSMAINMPSSTSYIPSSSLSQSCSSLRPSLGPNYYPQYHHASPFHFPSSSSSSGFDQFDVAGPSSSSHVAFRVVDPPRRPHSGIWFMLQASQNQLKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLKLESESEIEITCRGQQLLPFLTLQHVRDNIWTPRDTTTRPLLSDSSTTDHIGEISRFLVDYCINIIDDDDSKFAYLKVLEPELKNCDSVFRCLCGVEIFCHTHNSGEIVPLYFQTRRMRPFASWFFVEKQKERTTIVLNS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00479 486 MobiDBLite consensus disorder prediction 74 98 - -
Mepo3g00479 486 MobiDBLite consensus disorder prediction 69 108 - -
Mepo3g00479 486 PANTHER RING FINGER PROTEIN 2 395 IPR044171 GO:0007275
Mepo3g00479 486 MobiDBLite consensus disorder prediction 178 201 - -
Mepo3g00479 486 Gene3D - 296 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00479 Mepo-Chr3 6764257 6780394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00479 315 374 C3H Transcription Factor Family AT3G23060 45.000 1.21e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00479 - - lja:Lj1g3v3138970.1 364.77