Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00475 ATGAAGAAGAAGAACAAAACCATGTCTTTTCGACTTTGTTGTTCCATTGCAATGTGTGTTGCTGCAATTCTACTTCATCAATGTTCCTTTGCAGTTTCACACCCTAATAAGATCACAAATTTACCTGGTCAACCACATGTTGATTTTCATCAGTTTTCAGGTTATGTAAATGTTGATGATCAAAACAAAAAAGCACTCTTTTTCTACTTCGTTGAAGCTCAAAATGATGCTGTTTCCAAACCACTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCTTCTCTTGGTGTTGGTGCATTTTCAGAAAATGGGCCATTTAGGCCTAAAGGAGAGGCTTTGGTTAGGAACCAATTCAGCTGGAACACAGAGGCAAATATGTTGTACTTGGAATCACCAATTGGAGTAGGATTTTCTTATTCAACTGATACTTCATCTTATGAAGGTGTAAATGACAAGATTACAGCCAGGGATAATCTAATCTTCTTGCAAAACTGGTTTGTGAAGTTCCCTGAATACAGAAACAGAAGTTTGTTCATCGTAGGAGAGAGCTATGCCGGTCATTATGTTCCACAATTGGCTGAGCTTATGCTCCAATTCAACAAAAAGGAGAAGTTGTTTAATTTAAAAGGCATTGCTCTTGGTAATCCAGTTCTAGAATTTGCAACAGATTTTAATTCGAGAGCTGAGTTCTTTTGGTCTCATGGATTGATCTCAGACTTAACATTTAAAATGTTCACTTCAGTTTGTAACTATTCAAGATATGTGAGAGAGTACTATAACGGTGCCGTTTCTCCCATTTGTTCAAGTGTAATGAGCCAAGTTAGTACAGAAACAAGCAGATTTGTTGACAAGTATGATGTCACTCTTGATGTTTGTATATCTTCTGTGTTTTCACAAACCAAAGTCCTCAATCCTCAGCAAGTGACCGAAACGATTGATGTATGCGTTGAAGACGAAACTGTCAATTATCTTAACAGAAAAGATGTTCAATCAGCTTTACATGCACATCTGATTGGAGTACATAGGTGGTCTCCCTGCAGCAGTGTGTTGGATTATGAGTTGCGTGACTTGGAGATACCGACAATCACGGTTGTCGGCAAGCTAGCCAAGGCAGGAATTCCAGTTTTGGTCTACAGCGGTGATCAGGATTCAGTTATCCCATTGACCGGAAGTAGAACTTTAGTACATCAATTGGCAAAACAGCTGAGAATGAATACCACTGTACCATACAGGGTGTGGTTTGCGGGGCAACAGGTTGGTGGTTGGACTCAAGTTTATGGTAACATACTATCATTTGCAACAGTTAGGGGAGCATCACATGAAGTACCCTTTTCACAGCCTGAGAGATCACTTGTGTTGTTTAAGTCCTTCTTAGAAGGAAGCCCTCTACCAGAAGAATTTTGA 1404 0.3967 MKKKNKTMSFRLCCSIAMCVAAILLHQCSFAVSHPNKITNLPGQPHVDFHQFSGYVNVDDQNKKALFFYFVEAQNDAVSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALVRNQFSWNTEANMLYLESPIGVGFSYSTDTSSYEGVNDKITARDNLIFLQNWFVKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDLTFKMFTSVCNYSRYVREYYNGAVSPICSSVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHAHLIGVHRWSPCSSVLDYELRDLEIPTITVVGKLAKAGIPVLVYSGDQDSVIPLTGSRTLVHQLAKQLRMNTTVPYRVWFAGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEGSPLPEEF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00475 467 Gene3D - 315 351 - -
Mepo3g00475 467 FunFam Carboxypeptidase 31 464 - -
Mepo3g00475 467 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Mepo3g00475 467 Gene3D - 362 460 - -
Mepo3g00475 467 Gene3D alpha/beta hydrolase 33 294 IPR029058 -
Mepo3g00475 467 FunFam Carboxypeptidase 361 460 - -
Mepo3g00475 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Mepo3g00475 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Mepo3g00475 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Mepo3g00475 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Mepo3g00475 467 SUPERFAMILY alpha/beta-Hydrolases 38 464 IPR029058 -
Mepo3g00475 467 Pfam Serine carboxypeptidase 43 460 IPR001563 GO:0004185|GO:0006508
Mepo3g00475 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 447 IPR001563 GO:0004185|GO:0006508
Mepo3g00475 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00475 Mepo-Chr3 6678955 6683951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00475 323 463 Calmodulin-binding Proteins AT2G22960 26.241 1.30e-13 67.4