Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00470 ATGGCTTTGGAACAACCAAACCCTAATTCCGATGATGGAACTGTTAACGGTAACGGAACACCACCGTCCTCCGCCGTGAACGGTGGCGAGGATGGAAAACCAACGGCTAGGTTGCCACGTTGGACTAGGCAGGAGATTTTGGTTTTGATACAGGGAAAGAGTGATGCTGAAAGCCGGTTCAAACCGGGTCGGAATGGGTCTGGGTTTGGTTCGAGTGAACCGAAATGGGCGTTGGTTTCTTCGTATTGTAAGAAACACGGTGTGAACCGGGGTCCGATTCAGTGTCGGAAGCGGTGGAGCAACCTCGCCGGAGATTATAAGAAGATAAAGGAGTGGGAGAGTCAGGTGAGAGATGAAACGGAGTCGTTTTGGTTGATGAGGAATGATTTGAGGAGAGAGAGGAAATTGCCCGGGTATTTTGATAAGGAGGTTTATGGTATACTTGATTCGCCTTCGATGGAGGTGGCAGCGGCTGCAGCTCTGGCGGCATCAGTTGTTGTTCCGGTGAATGTGTCGGTGTCGGTTTCGGAGACGGTTGGAGGGGATGAGGAGGTTCATATTTATGATAGTAACAGGAAAGTGAGTGGTGAGGATGGGTTGTTTTCTGATTTTGAGAAGGATGAGGTTTTGGTGGCTAATAAGGATGTTCATGTTCCTTCACCTGTTCCTATATCAGAGAAGCAGTTTCTACCACTCCTCCGTGGCTGCCAAGGAGAAGGCAATACTCAAGGTACCAACAATGAGAAACAACCAGCCTCGAATCCAGAGACGGGTTCTACATCCCAAGGGGAACGTAAGAGGAAGCGGTTCGCAACCAATGGAGACGGCAATGAAGAGGAGGAAAGTTTGCATAGTCAATTAATTGATGTGTTGGAGAAAAATGGGAAGATGCTAAGTGAGCAACTAGAGGCTCAGAACATCAATTTTCAGTTGGATCGCCAGCAGCAGAATGAAACTGCGAGTAGCATAGTTGCTGTGCTTGATAAGCTTGCAAATGCTCTTGGAAGAATTGCTGATAAGCTGTAG 1026 0.4805 MALEQPNPNSDDGTVNGNGTPPSSAVNGGEDGKPTARLPRWTRQEILVLIQGKSDAESRFKPGRNGSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDKEVYGILDSPSMEVAAAAALAASVVVPVNVSVSVSETVGGDEEVHIYDSNRKVSGEDGLFSDFEKDEVLVANKDVHVPSPVPISEKQFLPLLRGCQGEGNTQGTNNEKQPASNPETGSTSQGERKRKRFATNGDGNEEEESLHSQLIDVLEKNGKMLSEQLEAQNINFQLDRQQQNETASSIVAVLDKLANALGRIADKL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00470 341 ProSiteProfiles Myb-like domain profile. 33 103 IPR001005 -
Mepo3g00470 341 MobiDBLite consensus disorder prediction 261 284 - -
Mepo3g00470 341 Gene3D - 41 108 - -
Mepo3g00470 341 MobiDBLite consensus disorder prediction 235 284 - -
Mepo3g00470 341 CDD GT1 39 110 - -
Mepo3g00470 341 Pfam Myb/SANT-like DNA-binding domain 40 126 IPR044822 -
Mepo3g00470 341 MobiDBLite consensus disorder prediction 1 25 - -
Mepo3g00470 341 MobiDBLite consensus disorder prediction 238 260 - -
Mepo3g00470 341 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 1 341 - -
Mepo3g00470 341 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00470 Mepo-Chr3 6596396 6600862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00470 40 111 Trihelix Transcription Factor Family AT1G33240 34.667 1.18e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo3g00470 Myb_DNA-bind_4 3.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00470 - - tpra:123890648 572.007