Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00468 ATGGGGTTGATTTGTGGATTTGGTTTTGTTTTTTGTGTTTTGATGTTTAAGAAAAGACACACTCCTTTTTCACTTGCAAGGAAATTTTTGTCTTTTCAGCCATTTGTTCTTCTTCTGTTCTTGTTTAGTTTGCATCATGACACTGTGCAATGCCAAGGAAGATTGAGTAAACACATGTCTTCTGAGCCTTCATCATCAACATCAGAGTATAAGGATGATCCTAGGAAGATTATAGTTAGCATAGTTTTAGGAGCTGTTACTGGATTAATTGGTTCTTTTCTCTTCGCATTCGTGATTCGTTGTGTTGTTCGGTATCTAAACCGAACACCAATCCTCAAAGGACCGGTCATATTCTCTCCGAAAATTGCATCGAAGACACTCCAAGTAGCTTTGACAAAAGAAAACCATATGCTTGGTTCAAGTCCAAATGGGAAATACTACAAAACTGTTCTTGAAAATGGTCTTATAATTGCAGTTAAAAGGCTAACACCCTTTGAGAGCAATTCACCAGAGAGTAGGAAAAAGTCGGTGAAGAGACAAATACAAATGGAGCTAGAGCTTCTAGCTAGTTTAAGACATAGGAATTTGATGAGTTTAAGGGCTTATGTTCGCGAAAACGATGGATTCTCGTTGGTTTATGATTATGTATCGACGGGTAGTCTTGCAGATGTGATGAATAGAGTGAGGGAAAATGAGTTGCAGATTGGTTGGGAAGCTAGGTTAAGGATTGCTGTTGGTGTGGTGAAAGGTCTTCAGTATCTTCACTTCACTTGTGTGCCTCAGATATTGCATTTTAATTTGAAGCCTACAAATGTGATGTTGGATGCTGAGTTTGAACCTAGATTGGCAGATTATGGATTGGCTAAACTTCTACCAAACTTAGATAGAGGGATTTCTGTCAACACTCCTCCTGAATGTTCCCATAATTGCAGCAGGTACACAGAAAAAAGTGACATATTCAGTTTTGGGATGATACTAGGTGTTTTATTAACTGGTAAGGACCCTACCGATCCATTCTTCGGAGAAGCGTCCAGAGGTGGAAGTTTGGGATGTTGGCTACGGCACTTGAAGCAAGCCGGCGAGGAAAGGGAAGCTCTAGATAAGAGTATTTTGGGGGAACAAGGTGAAGAAGATGAGATGCTAATGGCTGTTGGGATTGCTGCTGCTTGCTTATCTGATATGCCTGCTGACAGACCATCTAGTGATGAGCTTGTTCACATGCTAACACAACTCAATAGTTTTTGA 1245 0.4016 MGLICGFGFVFCVLMFKKRHTPFSLARKFLSFQPFVLLLFLFSLHHDTVQCQGRLSKHMSSEPSSSTSEYKDDPRKIIVSIVLGAVTGLIGSFLFAFVIRCVVRYLNRTPILKGPVIFSPKIASKTLQVALTKENHMLGSSPNGKYYKTVLENGLIIAVKRLTPFESNSPESRKKSVKRQIQMELELLASLRHRNLMSLRAYVRENDGFSLVYDYVSTGSLADVMNRVRENELQIGWEARLRIAVGVVKGLQYLHFTCVPQILHFNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGISVNTPPECSHNCSRYTEKSDIFSFGMILGVLLTGKDPTDPFFGEASRGGSLGCWLRHLKQAGEEREALDKSILGEQGEEDEMLMAVGIAAACLSDMPADRPSSDELVHMLTQLNSF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00468 414 Gene3D Phosphorylase Kinase; domain 1 119 215 - -
Mepo3g00468 414 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 43 410 - -
Mepo3g00468 414 ProSiteProfiles Protein kinase domain profile. 132 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00468 414 SUPERFAMILY Protein kinase-like (PK-like) 135 409 IPR011009 -
Mepo3g00468 414 Gene3D Transferase(Phosphotransferase) domain 1 216 413 - -
Mepo3g00468 414 Pfam Protein kinase domain 134 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00468 414 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 124 215 - -
Mepo3g00468 414 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 216 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00468 Mepo-Chr3 6576534 6578885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00468 78 411 Receptor kinase-like Gene Family AT2G31880 34.085 5.90e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Mepo3g00468 Pkinase 4.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00468 - - gmx:102664273 659.833