Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00442 ATGGGTAGAAAAAAAAACGAGGACTGCCGGAAACACGTTACAGAAGTAGAAAATGGTCGTAAATGGAAATGCAATTATTGTAATATTGAGTATAGTGGAGGAGCTACAAGAATTGAAGCACACCTGGGGTTGAATGGAAAACGAGGAGGCATTGTGCTATGCTCCGATTATCCTCATGTGGTTGGTAATGAAGGAGTTCACAACAATATGGCATCCACTTCAAGTAACCCACCACCAGAAGCTGAAGCTGTGATTAATAGAGTTGTTTATTCAACACATGATCAAGTGGCTGAAGGTGTTCCAGAAGTGATTGGCAGTCATACCAGAAGCTCGGTTAACCATCAAAATAACGCTGAAATCATGAATATATCAGAAGGTGTGAACGGTAGCAGAAGTGTTGCCGAAAGTGAGATTAATCAATTAAAACAATTGGTTCTTGATTTAGAATGTGAGGAAAATGATATTGCAAAACAACAGCAATCGTTGGAGTCTCGGGGCAAAAAGCGCAAACCAGAAGTTGATGTATGGTTGAGAGAATTACAAGAAATGAAAGGAGACATAAATAATAACTTAAATGACACTCCTTATGTAAGTGGATTGATAAAGAAGATGAAAATACACAAGGAGAAGAAGCCTCTCACTTTGTCGACTGAATTTGTTGGGAAACAATTAGACTTACATATCAAGAGAGTATTTAAACTTTTAGAAGACGACAAAGTGTTTGTTATTGGCATATGTGGAATGGGAGGAGTGGGAAAAACTTTACTTGCAACTCTCGTTGAGGATGAAGTAAAAAGGAAAGCAATTTTTAAGGATGTGTTTTGGGTCACTGTTTCTCACAATTATAGCATCTCAAAATTGCAACATAATATTGCAAAAAGAATAGGTGTGAAGCTTGACAAAGACGATGAAAATATTAGAGCTGACAAATTGTCTTTGGTATTGGAGAAAAAGGGAAAATCAATTCTTATTTTGGATGATGTTTGGAAATATATTGATTTGCAGAAGGTGGGAATTCATCCAAATGTGAATGGCATTAAAGTGATTCTAACAACTCGTTTGAAATATGTATGTCACCAGATGGATTGCCTGCCATATGCTATACTGCAAATGTATCCTCTCAACACATGTGAAGGTTGGGAGTTGTTTATGCTAAAACTCGGACATGATGGAACACCTAGGATACTTCCACATGAATTAGAAAAGATTGCGAGTTGTATTGTAGAGAGATTTAGGGGTTTACCACTTGCAATCAATGTGATGGCTAGAACCATGAAAGGGATTGAAGACATTCATCAATGGAAGCATGCACTCAATAAACTTAAAAAATTGGAAATGGGACAAGAGGTGGAAGAAGAAGTGTTCAAAGTATTAAAAAGTAGCTTTGATAATTTGATGGAAAAAAACTTAAAAAACTGTTTTTTGTATTGTGCATTATTATCTATTGAAGATTTGGGTATAGATTTGGATCAGATTAAAAAAGATGAGCTGATCATGAAGCTAGTTGACAATGGGCAGATAAATGGGAGTATGTGTTTGGAAGAAATATTTGATGAAGGGAGTACCATATTGAATACGCTTGAAGCCCATTCTTTGATTAGTATTTATAATAATTATTCAGTATCCACACATCCCTTGGTGAGTAATATGGCCTGTTATATCTTGAAAGAGAGTCAGAGGAATGTTCCTCATGAATCAAGGAAGCATTCCAGAGCTGAGGAAGAGACTGAAAATAAAGATGTTAGTAAGGTACTTAGATGCCTCACTCAGAATAGAGAGGCTGCTAAAAAAAGCCGGGAGCACAAAAAGGATGATGTAAAACAATTGGAATCAAGCAGATTAAAGCTAATGCAATTGGAGCTGGAGATTGGGAGAGTAAGAAAGCAGTTGCAGGGTATTTGCACAAGAAGTGCATTAGATACCAGTTTTATGGGATCATCTGAAACAATAAACCCAGGCATTGTTGCGTTTGGAATTGAATATGGAAATTGGGTTGACAAGAACCATAGGCGGAACGAAGAACTCAGAAATGCACTTCAAACTAATGTGTCCGAAGTCCAGCTCCGTCTAGTTGCTCAGAGTGTCTTGAATGATTACTCCGATCTTTTCAGAATAAAAACTAATGCTGCAAAGGCTGATCCTCTCTATTTAATCTCCGGTGTGTGGAAACCATCCGTAGAGAGCCTTTTCCTATGGTTTGGAGGATCTCGCCCATCACAGCTTCTTAATCTCATTCTGCCACAACTCGAGCCTTTAACTGATGAACAAATTTTGAACATTAAAAAACTTCACTTGTGCTCTCAGCAAGTCGAAGATGCTCTTTCACAAGGACTCAATAAACTCCTGCGGAGTCTGGTCCAAGACATGGCACTTGATCCATTAAATGTAGCAAATCATGAAATTCGGATGGCTATCGCTATAGATAAATTTGAGGGACTAGAGGGTTTTGTAATCCAGGCAGATCATCTCAGGCAGGAAACTCTGATACACATGTCACGCATCCTGTCTACACACCAAGCTGCTAGGGGCTTGATTGCTCTTGGGGAATACTTTCATCGTCGTCGTACTCTTTGTTCTCTTTGGACTTCTCGTCCATGCGATTCCATGATATCACCTAGGATTACTCCTTAG 2631 0.3831 MGRKKNEDCRKHVTEVENGRKWKCNYCNIEYSGGATRIEAHLGLNGKRGGIVLCSDYPHVVGNEGVHNNMASTSSNPPPEAEAVINRVVYSTHDQVAEGVPEVIGSHTRSSVNHQNNAEIMNISEGVNGSRSVAESEINQLKQLVLDLECEENDIAKQQQSLESRGKKRKPEVDVWLRELQEMKGDINNNLNDTPYVSGLIKKMKIHKEKKPLTLSTEFVGKQLDLHIKRVFKLLEDDKVFVIGICGMGGVGKTLLATLVEDEVKRKAIFKDVFWVTVSHNYSISKLQHNIAKRIGVKLDKDDENIRADKLSLVLEKKGKSILILDDVWKYIDLQKVGIHPNVNGIKVILTTRLKYVCHQMDCLPYAILQMYPLNTCEGWELFMLKLGHDGTPRILPHELEKIASCIVERFRGLPLAINVMARTMKGIEDIHQWKHALNKLKKLEMGQEVEEEVFKVLKSSFDNLMEKNLKNCFLYCALLSIEDLGIDLDQIKKDELIMKLVDNGQINGSMCLEEIFDEGSTILNTLEAHSLISIYNNYSVSTHPLVSNMACYILKESQRNVPHESRKHSRAEEETENKDVSKVLRCLTQNREAAKKSREHKKDDVKQLESSRLKLMQLELEIGRVRKQLQGICTRSALDTSFMGSSETINPGIVAFGIEYGNWVDKNHRRNEELRNALQTNVSEVQLRLVAQSVLNDYSDLFRIKTNAAKADPLYLISGVWKPSVESLFLWFGGSRPSQLLNLILPQLEPLTDEQILNIKKLHLCSQQVEDALSQGLNKLLRSLVQDMALDPLNVANHEIRMAIAIDKFEGLEGFVIQADHLRQETLIHMSRILSTHQAARGLIALGEYFHRRRTLCSLWTSRPCDSMISPRITP 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00442 876 Coils Coil 131 161 - -
Mepo3g00442 876 Coils Coil 592 629 - -
Mepo3g00442 876 Pfam NB-ARC domain 228 464 IPR002182 GO:0043531
Mepo3g00442 876 FunFam Probable disease resistance protein At1g61300 202 364 - -
Mepo3g00442 876 PRINTS Disease resistance protein signature 315 329 - -
Mepo3g00442 876 PRINTS Disease resistance protein signature 242 257 - -
Mepo3g00442 876 PRINTS Disease resistance protein signature 411 425 - -
Mepo3g00442 876 Gene3D - 582 636 - -
Mepo3g00442 876 ProSiteProfiles DOG1 domain profile. 654 864 IPR025422 GO:0006351|GO:0043565
Mepo3g00442 876 Pfam Seed dormancy control 673 746 IPR025422 GO:0006351|GO:0043565
Mepo3g00442 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 477 IPR027417 -
Mepo3g00442 876 PANTHER TRANSCRIPTION FACTOR TGA9 550 866 - -
Mepo3g00442 876 Gene3D - 374 466 IPR042197 -
Mepo3g00442 876 Gene3D - 200 366 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00442 Mepo-Chr3 6101313 6177102 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00442 574 865 Calmodulin-binding Proteins AT1G22070 51.361 5.29e-99 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00442 - - mtr:25497666 825.469