Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00427 ATGGGTAAGAAAAAGTCAGAGGATGCAGGACCATCGACAAAGGCTAAACCAGGTAGCAAAGATGTTTCTAAGAAGGAAAAATTTTCTGTCTCGGCCATGTTGGCAGGCATGGATGAAAAAGCTGATAAGCCTAAAAAGGCATCTTCAAATAAGGCGAAGCCAAAACCTCCCCCGAAAGCTTCTGCATACACTGATGATATTGATCTTCCTCCCTCTGATGATGATGAGTCTGAAGAGGAGCAAGAGGAAAAACATAGGCCAGATTTGAAGCTACTTGAGGTCTCTATTGCTGAAAAAGAGTTGAAAAAGCGCGAAAAGAAAGATATTTTAGCTGCCCATGTGGCTGAACAGGCAAAGAAAGAAGCTCTTAGGGATGATCGTGATGCTTTCACTGTTGTCATCGGAAGTCGGGCTTCAGTGCTTGATGGAGACGATGGTGCTGATGCTAATGTCAAAGATATAACAATAGAAAATTTTTCTGTGTCTGCTCGGGGTAAAGAACTTCTGAAGAATACTTCAGTAAAGATATCTCATGGAAAACGATATGGTTTGATTGGGCCAAATGGAATGGGCAAGTCAACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCGGTGCCTAAGAATATTGATGTCCTTCTGGTTGAGCAGGAGGTAGTTGGCGATGATAAAACAGCGCTTGAAGCTGTTGTTTCAGCTAATGTTGAACTTATTAAAATTCGACAAGAAGTTGCTGATCTACAAAATGCAGCTTCTGGTGAAGAAGGTGTGGATAAAAATGATACTAACGAGGAAGAGGATGCAGGAGAAAAGCTAGCAGAGCTGTATGAACAATTACAACTGATGGGGTCTGATGCTGCTGAATCTCAAGCGTCAAAGATTTTAGCTGGTCTGGGTTTTACAAAGGACATGCAGGGCCGTCCTACAAAATCCTTTAGTGGCGGCTGGAGGATGAGAATTTCTTTAGCTCGAGCACTTTTTGTACAGCCCACTCTATTATTGCTCGATGAACCCACTAATCATCTTGACTTGAGGGCTGTTCTGTGGTTAGAGGAGTACTTGTGTCGTTGGAAAAAAACTTTGGTGGTTGTATCACACGATAGAGATTTTCTCAATACAGTATGCTCTGAGATTATTCATCTGCATGATTTGAAACTTCATTTCTATCGTGGAAATTTTGATGCTTTTGAGAGTGGGTATGAACAGCGTCGTAGAGAAGCGAATAAGAAGTATGAGACTTTTGACAAGCAATTGAAAGCAGCTAGAAGAACCGGGAACAAGGCTCAACAAGATAAGGTGAAGGACAGAGCTAAGTTTGCAGCAGCTAAGGAATCTAAAAGCAAAAGCAAGGGAAAGGGAAAGGTTGATGAGGATGAGACCCAAGTAGAGGTACCGCACAAGTGGAGGGACTACAGCGTGGAATTCCACTTTCCTGAACCTACTGAACTCACACCTCCACTTCTGCAGCTTATTGAAGTGAGCTTCAGTTACCCAAACCGAGAGGATTTTAGACTCTCGGATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATTGTTGGGCCTAATGGTGCTGGAAAATCTACACTGCTGAATCTTCTAGCTGGTGATTTGGTTCCAAGTGAAGGTGAAGTTCGAAGAAGTCAGAAGTTGAGGATAGGGAGATATTCCCAACACTTTGTGGACCTACTTACAATGGATGAAACACCTGTTCAGTACCTTCTTCGTCTCCATCCAGACCAGGAGGGGCTTAGTAAGCAAGAGGCTGTTCGTGCAAAACTTGGTAAATATGGGCTACCTAGTCATAATCATCTTACCCCCATTGTCAAACTATCAGGAGGACAGAAAGCTCGGGTGGTATTCACATCGATATCCATGTCAAGACCTCACATTTTATTGTTAGATGAACCCACAAATCATCTGGATATGCAAAGTATTGATGCATTGGCTGATGCGCTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCACGAGTCTGTGATGATGAAGAACGGAGTCAAATATGGGTTGTTGAAGATGGCACTGTCAGAAATTTCCCTGGAACATTTGACGATTACAAGGATGATCTGCTGAAAGAGATTAAAGCTGAAGTTGATGATTGA 2148 0.426 MGKKKSEDAGPSTKAKPGSKDVSKKEKFSVSAMLAGMDEKADKPKKASSNKAKPKPPPKASAYTDDIDLPPSDDDESEEEQEEKHRPDLKLLEVSIAEKELKKREKKDILAAHVAEQAKKEALRDDRDAFTVVIGSRASVLDGDDGADANVKDITIENFSVSARGKELLKNTSVKISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANVELIKIRQEVADLQNAASGEEGVDKNDTNEEEDAGEKLAELYEQLQLMGSDAAESQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDLKLHFYRGNFDAFESGYEQRRREANKKYETFDKQLKAARRTGNKAQQDKVKDRAKFAAAKESKSKSKGKGKVDEDETQVEVPHKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKYGLPSHNHLTPIVKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVRNFPGTFDDYKDDLLKEIKAEVDD 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00427 715 SMART AAA_5 178 384 IPR003593 GO:0016887
Mepo3g00427 715 SMART AAA_5 514 690 IPR003593 GO:0016887
Mepo3g00427 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 488 713 IPR003439 GO:0005524
Mepo3g00427 715 FunFam ABC transporter F family member 4 453 715 - -
Mepo3g00427 715 Coils Coil 230 250 - -
Mepo3g00427 715 Gene3D - 451 714 IPR027417 -
Mepo3g00427 715 ProSitePatterns ABC transporters family signature. 312 326 IPR017871 GO:0005524|GO:0016887
Mepo3g00427 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 699 IPR027417 -
Mepo3g00427 715 Gene3D - 151 435 IPR027417 -
Mepo3g00427 715 CDD ABCF_EF-3 154 385 - -
Mepo3g00427 715 MobiDBLite consensus disorder prediction 1 88 - -
Mepo3g00427 715 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 122 709 - -
Mepo3g00427 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 401 IPR027417 -
Mepo3g00427 715 CDD ABCF_EF-3 488 690 - -
Mepo3g00427 715 Pfam ABC transporter 505 640 IPR003439 GO:0005524
Mepo3g00427 715 Pfam ABC transporter 169 340 IPR003439 GO:0005524
Mepo3g00427 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 154 408 IPR003439 GO:0005524
Mepo3g00427 715 MobiDBLite consensus disorder prediction 421 461 - -
Mepo3g00427 715 FunFam ABC transporter F family member 4 152 436 - -
Mepo3g00427 715 Coils Coil 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00427 Mepo-Chr3 5782320 5785831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00427 487 700 Calmodulin-binding Proteins AT2G36910 28.750 4.43e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00427 K06184 - gmx:100806865 1139.02