Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00418 ATGATGAAGCCAAGAAGAGTTATATCTCTTCTTTGTTTTGTGTTTTTCTTGTTTTTGAGCTTTTCATGTTCAAATGCTTTGCTTTCTTCTAAAGGAGTAAACTATGAAGTGCAAGCTTTAATGAGTATTAAAGACTCTCTAGTGGATCCACATGGTGTTCTAGAAAATTGGGATGGTGATGCAGTTGATCCATGTAGTTGGACTATGGTTACATGTTCTAGTGAAAATCTTGTTACTGGCTTGGGTACTCCAAGTCAAAGTTTATCAGGTAGTTTATCTCCAAGCATAGGGAATTTAACCAACCTTCAGATGGTGCTGCTACAGAATAACAACATAACCGGATCAATCCCTTCAGAATTAGGAAAACTTCCTAAGCTTCAAACTCTTGATCTGTCTAATAACTTCTTCAATGGCGAAATTCCTCCCTCTCTTGGTCACTTAAGAAGCCTTCAATACTTGAGGTTGAACAATAACAGTCTTGTTGGTGAATGTTCAGAATCACTAGCTAACATGACACAACTTGTTTTACTTGATCTGTCCTACAACAATCTTAGTGGACCAGTACCAAGAATTTTGGCGAAATCATTTAGCATTGTTGGTAATCCTCTTGTTTGTGCTACTGGAAATGAACCAAACTGTCATGGGATGACATTGATGCCAATATCCATGAACTTAACCAATACTCAAGATACTTTACCATCAAGCAGACCAAAATCTCATAAAATGGCTATTGTCTTTGGCTTGAGTCTTGGATGTCTCTGCATGATAGTTATTGGTTTTGGACTTGTTCTTTGGTGGAGACATAAGCATAATCAACAAGCATTCTTTGACGTCAAAGACCGGCACCATGAAGAAGTTTACCTTGGAAACTTGAAGAGGTTTTCATTCAGAGAACTCCAAACTGCTACAAATAACTTCAGCAGCAAAAACTTAGTTGGAAAAGGTGGGTTTGGAAATGTCTACAAAGGAGTTCTTTCAGATGGCACTGTAATAGCCGTAAAGAGGCTTAAAGACGGCAATGCAATTGGAGGAGAGATTCAATTTCAGACTGAAGTTGAAATGATTAGCCTTGCAGTTCATAGAAACCTTCTCAGACTTTATGGATTTTGCATGACTTCATCAGAAAGGCTTTTAGTTTATCCTTACATGTGCAATGGAAGTGTTGCTTCCCGTTTGAAAGGTAAACCTGTCTTGGATTGGGGAACAAGGAAGAACATTGCATTAGGAGCAGCAAGAGGACTACTATACCTTCATGAACAATGTGATCCAAAGATAATCCATAGGGATGTCAAAGCTGCAAACATATTGCTTGATAACTATTATGAAGCTGTAGTTGGTGATTTTGGTTTGGCAAAGCTTTTGGATCATCAAGATTCACATGTTACTACTGCAGTGAGAGGAACTGTAGGGCATATTGCACCGGAATATCTTTCCACAGGACAATCCTCCGAGAAGACTGACGTGTTTGGATTTGGCATTCTTCTCCTTGAGTTAATCACAGGTCAGAGAGCCTTAGAATTTGGAAAAGCTGCTAACCAAAAAGGCGCCATGCTTGATTGGGTGAAGAAAATTCATCAAGAGAAGAAACTTGAATTACTTGTAGACAAGGATCTAAAGAGCAACTATGACAAAATTGAGCTTGAAGAAATGGTTCAAGTGGCTCTCTTATGTACTCAATATCTTCCAAGCCATAGACCTAAAATGTCCGAAGTTGTTCGCATGCTTGAAGGTGATGGACTAGCCGAAAGATGGGAAGCTTCTCAAAAAACCGACACTTCCAAATTCAAACATCAAGAATCATCTTTATCAGATAGATATTCTGATCTTACTGATGATTCTTTGTTATTAGTCCAAGCTATGGAGCTATCAGGACCAAGGTGA 1881 0.3865 MMKPRRVISLLCFVFFLFLSFSCSNALLSSKGVNYEVQALMSIKDSLVDPHGVLENWDGDAVDPCSWTMVTCSSENLVTGLGTPSQSLSGSLSPSIGNLTNLQMVLLQNNNITGSIPSELGKLPKLQTLDLSNNFFNGEIPPSLGHLRSLQYLRLNNNSLVGECSESLANMTQLVLLDLSYNNLSGPVPRILAKSFSIVGNPLVCATGNEPNCHGMTLMPISMNLTNTQDTLPSSRPKSHKMAIVFGLSLGCLCMIVIGFGLVLWWRHKHNQQAFFDVKDRHHEEVYLGNLKRFSFRELQTATNNFSSKNLVGKGGFGNVYKGVLSDGTVIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTSSERLLVYPYMCNGSVASRLKGKPVLDWGTRKNIALGAARGLLYLHEQCDPKIIHRDVKAANILLDNYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLELLVDKDLKSNYDKIELEEMVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAERWEASQKTDTSKFKHQESSLSDRYSDLTDDSLLLVQAMELSGPR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00418 626 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
Mepo3g00418 626 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Mepo3g00418 626 Gene3D Phosphorylase Kinase; domain 1 275 382 - -
Mepo3g00418 626 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Mepo3g00418 626 SUPERFAMILY L domain-like 35 200 - -
Mepo3g00418 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Mepo3g00418 626 Gene3D Transferase(Phosphotransferase) domain 1 383 595 - -
Mepo3g00418 626 FunFam Putative LRR receptor-like serine/threonine-protein kinase 33 215 - -
Mepo3g00418 626 Pfam Protein kinase domain 307 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00418 626 FunFam Somatic embryogenesis receptor-like kinase 1 383 595 - -
Mepo3g00418 626 SMART LRR_typ_2 99 122 IPR003591 -
Mepo3g00418 626 SMART LRR_typ_2 171 194 IPR003591 -
Mepo3g00418 626 SMART LRR_typ_2 123 146 IPR003591 -
Mepo3g00418 626 SMART LRR_typ_2 147 170 IPR003591 -
Mepo3g00418 626 SMART serkin_6 306 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00418 626 ProSiteProfiles Protein kinase domain profile. 306 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00418 626 FunFam Somatic embryogenesis receptor kinase 1 275 382 - -
Mepo3g00418 626 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 586 - -
Mepo3g00418 626 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Mepo3g00418 626 Pfam Leucine Rich repeats (2 copies) 100 140 IPR025875 -
Mepo3g00418 626 SUPERFAMILY Protein kinase-like (PK-like) 283 576 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00418 Mepo-Chr3 5693009 5697658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00418 9 626 Receptor kinase-like Gene Family AT5G16000 77.280 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mepo3g00418 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00418 - - gmx:100798412 1090.1