Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00415 ATGGTACCAAAACTCTCACATCTTGGATTTTCTTTACAAGGGAAGCTTTCTAAGTCAAATCCAAAACCAGTTAAAGTTGACATCCTTATCGGTACATTGTTTTACATGGCACCAGAGTATGTCCGAACCAATACTTTCACAGATAAATGTGACGTTTACTCCTTTGGTATGGTTCTACTTGAAGTAGTATGTACAAACTACAAACATACCATCTTTGATAAGATGAACATATTAGATAATCCAAATATGTTTTTAGAACGGCCGATTGAAGCAGCTAAATTTTTGGAGAGGTTTACAGCTTATGAGATTATTGATCCCATTCTCATGAGATTGATTGCGCCGCGGTGTTTGAAGGTGTTCATGGATGTCATGAAAAAATGCTTGAATATAGAACCAAACGAAAGACCATCAATGGGTGAGGTTGAGGTTGAACTCGAGCTTGCTCTCGCACTACAGGAGGAAACAGATGATGGGAAAATTAATGGAGGTTGA 492 0.3801 MVPKLSHLGFSLQGKLSKSNPKPVKVDILIGTLFYMAPEYVRTNTFTDKCDVYSFGMVLLEVVCTNYKHTIFDKMNILDNPNMFLERPIEAAKFLERFTAYEIIDPILMRLIAPRCLKVFMDVMKKCLNIEPNERPSMGEVEVELELALALQEETDDGKINGG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00415 163 SUPERFAMILY Protein kinase-like (PK-like) 3 142 IPR011009 -
Mepo3g00415 163 Gene3D Transferase(Phosphotransferase) domain 1 1 160 - -
Mepo3g00415 163 PANTHER OS07G0166700 PROTEIN 1 152 IPR045272 GO:0004714|GO:0006468
Mepo3g00415 163 Pfam Protein kinase domain 4 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00415 163 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00415 Mepo-Chr3 5643359 5644331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00415 31 159 Receptor kinase-like Gene Family AT4G39110 36.765 4.57e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo3g00415 Pkinase 1.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00415 - - mtr:25497582 206.838