Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00404 ATGCAAACCAAAGAGATTAATACAGGACTCAATTATTTACTCCCATATTCAGATCCATCTCCCTATCCATCATGTAACTACAACATGATCCAAAACACCATCCAAACACCTCAACATCCAAAACTCTCCAACCAGCTATATGGTTTCAACCAAAACCATATTCAAATCCTCCAAGACTTCAGTCCTCCATCCTCATGCATAAGCAGCAACTCAACTTCCGACGAAGCGGACGAACAAAACCTAGGTCTAATCAACGAAAGAAAACATCGAAGAATGGTATCGAACCGAGAGTCAGCACGCCGGTCGCGAATGAGGAAACAAAAACAGCTTGATGAGCTTTGGTCACAGGTGGTTTGGCTAAGGAATGAGAATCATCAATTACTAGATAAGCTCAACAATTTCTGTGAGACTCATGATAAAGTTGTCCAAGAGAATGTTCAATTGAAAGAACAAGCTTCAGAACTTCGACAAATGGTGTGTGATATGCAGTTACATAGTTCTTGTCTTCCTTTGAGTCCTATTGAAGATGTTCCTAGTATCACTTCACCAAATGTTAAATCTGATTCTTCAAACTAA 576 0.3958 MQTKEINTGLNYLLPYSDPSPYPSCNYNMIQNTIQTPQHPKLSNQLYGFNQNHIQILQDFSPPSSCISSNSTSDEADEQNLGLINERKHRRMVSNRESARRSRMRKQKQLDELWSQVVWLRNENHQLLDKLNNFCETHDKVVQENVQLKEQASELRQMVCDMQLHSSCLPLSPIEDVPSITSPNVKSDSSN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00404 191 Pfam bZIP transcription factor 87 139 IPR004827 GO:0003700|GO:0006355
Mepo3g00404 191 CDD bZIP_plant_GBF1 88 132 IPR045314 GO:0003700|GO:0006355
Mepo3g00404 191 FunFam BZIP transcription factor 85 136 - -
Mepo3g00404 191 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 85 148 IPR004827 GO:0003700|GO:0006355
Mepo3g00404 191 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 10 168 IPR044521 -
Mepo3g00404 191 SUPERFAMILY Leucine zipper domain 87 136 IPR046347 GO:0003700|GO:0006355
Mepo3g00404 191 Coils Coil 138 158 - -
Mepo3g00404 191 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 90 105 IPR004827 GO:0003700|GO:0006355
Mepo3g00404 191 Gene3D - 85 140 - -
Mepo3g00404 191 SMART brlzneu 83 147 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00404 Mepo-Chr3 5498253 5499165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00404 11 175 bZIP Transcription Factor Family AT3G30530 56.647 7.22e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g00404 bZIP_1 2.2e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00404 3 5498253 5499165 Mepo3g00404 3 5498253 5499165 ECH
Mepo5g03454 5 42594465 42595454 Mepo3g00404 3 5498253 5499165 PCT