Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00401 ATGACAATTGGAAGTCTTGCACCTAAGACAGAGAAGAAGAAATCATCGAGATCATCGAGAAAGAACAAGGCTGTTGTGAGTGAAAATGCACCTTTGTTGCCTAAAAGTCAGGAAAGTGATTCAGGGTTTGATGATTTCAATGGAGCTTCATTTTCCGGTGCCGTTTTCAACTTGGCGACTACGATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACTTTGAAACAGTTGGGGTTGATTCCTGGTCTTTGTGCTATCCTCTTGATGGCTTTTTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACAAGGGCAGGGAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTATGGCGCAGATCTGTGTTATTGTCAATAACATTGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTTTCTGGAACATCTTCAAGTGGAGAACATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACTGGGAGGACATTTGTTGTTCTTCTTACAACGGTTGCTATATTTACACCCCTCGCAAGCTTTAAGCGAATTGATTCGTTGAGATTCACATCTGCCCTTTCTGTTGCCCTGGCGGTTGTTTTTCTTGTCATTGCTGTGGGAATTTCTATTGTCAAGATTATAAGTGGAGGCATTACCATGCCGAGACTGTTCCCAGCTGTTACCGATGCAACATCAATTGTTAACCTATTCACTGTGGTTCCTGTGTTTGTGACTGCCTATATCTGTCACTACAATGTTCACAGCATAGATAATGAACTCGAGGACAACTCGCAGATGCAAGGCGTTGTACGTACAGCCCTCGGTCTATGCTCATCCGTGTATTTAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGATGCTGATCTTGGAATTCCTTTTGGTTCTTTACTCAACGATGCTGTTCGTATTAGCTACGCTGCACACCTCATGCTTGTATTTCCAGTTGTGTTTTTCCCATTGCGACTCAATATAGACGGTCTTCTCTTCCCTAAATCAAGACCTTTGGTTCTGGATAACTTCAGATTTGCATCAATGACTGTTTCCCTTATTGGTGTTATATTCTTGGGAGCAAATTTCATTCCTAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACCGCCGCAGTCTGTATAGGATTCATCTTTCCAGCTGCCATCACTCTTAAGGACCGCTACAACATAGCGACTAAATCTGACAAGATTTTATGCGTTGTTATGATAGTCCTAGCAGTCTTCTCAAACGTCGTCGCTATATATAGTGACGCCTATGCCTTGATCAAGCAGAACAAAACTTCACGCGAATGA 1404 0.4224 MTIGSLAPKTEKKKSSRSSRKNKAVVSENAPLLPKSQESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLIPGLCAILLMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKAMAQICVIVNNIGVLIVYMIIIGDVLSGTSSSGEHHYGILEGWFGVHWWTGRTFVVLLTTVAIFTPLASFKRIDSLRFTSALSVALAVVFLVIAVGISIVKIISGGITMPRLFPAVTDATSIVNLFTVVPVFVTAYICHYNVHSIDNELEDNSQMQGVVRTALGLCSSVYLMISFFGFLLFGEGTLDDVLANFDADLGIPFGSLLNDAVRISYAAHLMLVFPVVFFPLRLNIDGLLFPKSRPLVLDNFRFASMTVSLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLKDRYNIATKSDKILCVVMIVLAVFSNVVAIYSDAYALIKQNKTSRE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00401 467 PANTHER AMINO ACID TRANSPORTER 44 446 - -
Mepo3g00401 467 Pfam Transmembrane amino acid transporter protein 49 452 IPR013057 -
Mepo3g00401 467 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00401 Mepo-Chr3 5417996 5423257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00401 20 467 Amino Acid or Auxin Permease AAAP Family AT3G30390 70.000 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00401 K14207 - gmx:100796345 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00401 3 5417996 5423257 Mepo3g00401 3 5417996 5423257 ECH
Mepo5g03462 5 42713560 42718074 Mepo3g00401 3 5417996 5423257 PCT