Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00382 ATGGATATGGATAATACCATAGGCGTGAAAAAAGGTGCATGGACATACGAGGAAGACAACTTACTCAAGGCTTACATTAACAAGTATGGTGAAGGAAAATGGCATTTAATTCCTCAAAGAGCAGGTTCAGGATTGAATAGATGCCGAAAAAGTTGTAGATTGAGGTGGATAAATTATTTAAAGCCCAACATCAATAGAAAAAGCTTTTCTGAGGATGAAGTTGATATGATCCTAAGGTTACACAAACTCTTAGGCAATAGATGGTCATTTATTGCTGCAAGGCTTCCGGGTAGAACTGCTAATGGTGTGAAAAACTATTGGAACACACACTTGTTGAAGAAGGTGGTTTCAAAAAAAGAAGAGAAAGAAAAAGAGAAACCTAAAGAGACAATGAAATCTCATGAAGTTATTAAACCTCGACCTATATCTTTTTCAACTCAATCATCTTGGTTGAATGTGGAGCACAATAATTTTGTGACACAACCAATATTGGCTTCAAACAATGATGGTAGTTTTCCTAGAGATCGTGACGACAAAAAGACAAACAATGGTGGCACAATAAGTTTTCCTAGTTTTCCTAAGGAGACAATGATGGTTCCTAACCAAATTGGTAAATACTATGCTTCTTCTTCACAACCAAGTCTAGGTAATGTCCCAATACCATGTACAATGTGGTCAGACAGTTTATGGAACTTGGGGTAG 702 0.3689 MDMDNTIGVKKGAWTYEEDNLLKAYINKYGEGKWHLIPQRAGSGLNRCRKSCRLRWINYLKPNINRKSFSEDEVDMILRLHKLLGNRWSFIAARLPGRTANGVKNYWNTHLLKKVVSKKEEKEKEKPKETMKSHEVIKPRPISFSTQSSWLNVEHNNFVTQPILASNNDGSFPRDRDDKKTNNGGTISFPSFPKETMMVPNQIGKYYASSSQPSLGNVPIPCTMWSDSLWNLG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00382 233 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mepo3g00382 233 SUPERFAMILY Homeodomain-like 8 107 IPR009057 -
Mepo3g00382 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 64 IPR017930 -
Mepo3g00382 233 CDD SANT 68 111 IPR001005 -
Mepo3g00382 233 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 166 - -
Mepo3g00382 233 ProSiteProfiles Myb-like domain profile. 6 60 IPR001005 -
Mepo3g00382 233 CDD SANT 13 60 IPR001005 -
Mepo3g00382 233 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Mepo3g00382 233 Pfam Myb-like DNA-binding domain 11 60 IPR001005 -
Mepo3g00382 233 FunFam Myb transcription factor 11 65 - -
Mepo3g00382 233 Gene3D - 4 66 - -
Mepo3g00382 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Mepo3g00382 233 MobiDBLite consensus disorder prediction 164 193 - -
Mepo3g00382 233 Gene3D - 67 140 - -
Mepo3g00382 233 SMART sant 10 62 IPR001005 -
Mepo3g00382 233 SMART sant 65 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00382 Mepo-Chr3 5190889 5193362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00382 8 169 MYB Transcription Factor Family AT1G66370 51.648 8.75e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g00382 Myb_DNA-binding 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00382 - K16166 mtr:11424892 385.185