Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00373 ATGGGTTCCATTTGTTCTTGTTTAAGTGTTGATGATTTTGAAGATTACATGAATCCGCATAGTCATGTGTATAGGAACTGCGTTTGTGTTGGTTGCTTCCTACAAAACATTTCGGCTGTTTATTCATCAATATTCCGTAGAAGGGAAATGCAGGCGCTTCCTTCATCTGTACAGGGGGCAGCATCTATGACTAATACAGCATCACTTGATAATTCTCTAGCTGAGATATACCGTTCTCCTCCAAGGCCGTTACCTTATGATGCAGACCCTAGGCATTTCTGCTCACAGCATGACGGACTTGTTTCAAGACGTGAGAAGGGTTCCAGTCATTTGAACGAAGAGTCAGAACCTCTAAGGGTTGATTTGGATGTAGATCCAGAATCTTTGAGTTCGAGTGGTAAGTGGAAAGAATCCACCGGAAAAGATGGGTCAAAGGAATACCGTTCGAAGTCCTCAGTAAGACTTTCGTCAGCAAAACTTACAACTGGAGCTGCGCTTGTGTATGCATCATCAGAAGAGGAGGATTGTTGTCCAACATGTCTTGAAGAATACACTGAAGAGAATCCAAAGATAGTGACAAAATGTAATCACCATTATCATCTTGGTTGCATATACGAGTGGATGGAGAGAAGTGACAGCTGTCCTGTTTGTGGGAAGGTGATGTTATTTGATGAATCGCCATAA 684 0.4225 MGSICSCLSVDDFEDYMNPHSHVYRNCVCVGCFLQNISAVYSSIFRRREMQALPSSVQGAASMTNTASLDNSLAEIYRSPPRPLPYDADPRHFCSQHDGLVSRREKGSSHLNEESEPLRVDLDVDPESLSSSGKWKESTGKDGSKEYRSKSSVRLSSAKLTTGAALVYASSEEEDCCPTCLEEYTEENPKIVTKCNHHYHLGCIYEWMERSDSCPVCGKVMLFDESP 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00373 227 CDD RING-H2_AIRP1-like 173 221 - -
Mepo3g00373 227 Pfam RING-H2 zinc finger domain 172 217 IPR024766 GO:0008270
Mepo3g00373 227 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 60 225 - -
Mepo3g00373 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 223 IPR013083 -
Mepo3g00373 227 MobiDBLite consensus disorder prediction 104 152 - -
Mepo3g00373 227 SUPERFAMILY RING/U-box 171 223 - -
Mepo3g00373 227 SMART ring_2 177 217 IPR001841 -
Mepo3g00373 227 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
Mepo3g00373 227 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00373 Mepo-Chr3 5057684 5062605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00373 1 227 C3H Transcription Factor Family AT5G15790 55.172 1.19e-87 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00373 - - gmx:100788192 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00373 3 5057684 5062605 Mepo3g00373 3 5057684 5062605 ECH