Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00350 ATGAGGCTTCTCATATCAGTTCTATGTGTTATTGTGCTATTTTCTTATGCAGTTGCGTATGATCCTTTGGATCCTAACGGAAACATAACGATCAAATGGGATGTTGTGTCTTGGACAGCCGATGGCTATGTGGCAGCGGTAACAATGAGCAATTTTCAAATGTACCGGCACATAATGAATCCGGGATGGACATTAGGATGGTCATGGGCTAAGAAAGAAGTTATATGGTCAATGGTAGGATCTCAAACAACTGAGCAAGGAGATTGCTCTAAATTCAAAGGCAATGTACCTCATTGTTGCAAGAAAACTCCAACAGTTGTAGACCTTCTCCCTGGTGTACCATACAATCAACAATTCTCAAACTGCTGTAAAGGTGGAGTTGTAGCAGCATGGGGACAAGACCCTTCATCAGCAGTTTCAGCTTTCCAAGTTAGTGTTGGACAAGCTGGTACTTCAAACAAGACAGTGAAACTCCCTAAGAACTTCACTCTCTTGGCTCCTGGACCTGGCTATACTTGTGGTCCTGCTAAGATTGTTCCTTCCACCACTTTCCTCACCACGGATAAACGTCGCAAGACTCAAGCACTTATGACATGGAATGTTACCTGCACATACTCACAATTTCTTGCAAGAAAGAATCCAAGTTGTTGTGTATCTTTGTCATCCTTCTATAATTCGACAATTACTCCTTGTCCTTCTTGTGCCTGTGGCTGCCAGAACAAGAAGAATTGTGTCAAGGGTCACTCCAAATTCCTAGACATGGTAGGGTTACATACTCCAAAGAGAGACAATGAACCATTACTGCAGTGTACCCATCATATGTGCCCCATTAGGGTACACTGGCATGTGAAGACCAACTATAAGGACTATTGGAGAGTCAAGATTGCTGTTACAAATTTCAATTATAGATTGAATTATTCTCTTTGGACTCTTGCTGTTCAACATCCAAATCTTAACAATGTCACTCAAGTTTTCAGCTTTGATTACAAGCCTTTGCTTGCCTATCAATCCATAAATGACACTGGTATGTTCTATGGAACGAAATTCTTTAATGATCTGTTGATGGAAGCTGGACCAAGTGGAAATGTTCAATCAGAAGTGCTTCTTCAAAAGAACAAGGAAACATTCACACTCAACCAAGGTTGGGCATTTCCTAGAAGAGTCTACTTCAATGGTGAAGAATGCATGATGCCTTCACCTGATACCTACCCCTACCTCCCTAATTCTTCACCTGTGAATGTCCTCAACTTCCCAACATTCATTATCTCATTCCTTCTCCTGCTAGCTCTTTGGTGA 1296 0.4159 MRLLISVLCVIVLFSYAVAYDPLDPNGNITIKWDVVSWTADGYVAAVTMSNFQMYRHIMNPGWTLGWSWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAVSAFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTTFLTTDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNSTITPCPSCACGCQNKKNCVKGHSKFLDMVGLHTPKRDNEPLLQCTHHMCPIRVHWHVKTNYKDYWRVKIAVTNFNYRLNYSLWTLAVQHPNLNNVTQVFSFDYKPLLAYQSINDTGMFYGTKFFNDLLMEAGPSGNVQSEVLLQKNKETFTLNQGWAFPRRVYFNGEECMMPSPDTYPYLPNSSPVNVLNFPTFIISFLLLLALW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00350 431 Coils Coil 428 431 - -
Mepo3g00350 431 PANTHER PROTEIN COBRA 7 423 IPR006918 GO:0010215|GO:0016020
Mepo3g00350 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Mepo3g00350 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00350 Mepo-Chr3 4702758 4706778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00350 1 430 COBRA Gene Family AT3G29810 64.091 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00350 - - gmx:100783410 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00350 3 4702758 4706778 Mepo5g03484 5 43087711 43091422 PCT