Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00349 ATGGGTTTCTCTTTCTTATCAAAACCAACTCCTTGCATTCTCTTCTTCTTTCTACTTTCTTTCACTTCAACAGATGCTTATGACCCACTTGACCCAAATGGGAATATCACAATCAAATGGGATATTATACAATGGACCCCTGATGGTTATGTTGCCACAGTTACGATGAACAACTTCCAACAATATCGTCACATCGCTTCCCCTGGCTGGTCACTAGGATGGACATGGGCAAAAAAGGAGGTAATCTGGAGTATGGTGGGATCACAGACCACAGAACAAGGCGATTGTTCAAAATTTAAAGGAAATGTTCCACATTGCTGTAAAAAGAATCCAACCGTTGTAGATTTACTTCCCGGAACGCCTTACAATCAGCAAATTGCGAATTGCTGCAAAGGTGGTGTGCTTAGTTCATGGGCTCAAGATCCTACCATGGCAGTTGGGGCGTTTCAAATCAGTGTTGGTAGAGCCGGAACCACAAACAAAACTGTTAAAGTGCCTAAAAACTTCACCTTGAATGCCCCGGGACCTGGTTATACTTGTGGGCCGGCAAAAATTGTGAGACCTACTCAGTTTATTCAACCGGACAAAAGGAGAGTGACTCAAGCACTCATGACATGGAACGTTACATGCACATATTCGCAATTTCTAGCTCAGAAAACTCCCACTTGCTGTGTCTCCCTCTCATCTTTCTATAACGATACCATTGTACCCTGCCCAACATGTGCATGTGGCTGCCAGAGTAACTCATCTCAGTCGGGGACTTGTGTTAATCCAAATACGCCACATTTGGCATCGGTTGTTTCTGGTAACGGAAAGAATAACTTATCACCTTTGGTTCAATGTACTAGTCATATGTGTCCAATCCGAATCCACTGGCATGTTAAGGTTAACTACAAGGAATACTGGCGTGTGAAGGTTTCCATTACTAATTTTAATTACCGTATGAATTATTCCGATTGGAACTTGGTTGTTCAGCATCCAAACTTCGACAATCTGACTCAGCTGTTCAGTTTCAACTACAAGTCATTAAATCCTTATGGTTTAATAAATGATACGGCAATGCTTTGGGGAGTTAAGTTCTATAATGATTTTCTTAATCACGCCGGCCCTAGTGGCAATGTTCAATCTGAGCTACTCTTCCGAAAGGATAAATCAACTTTCACTTTTGATAAGGGCTGGGCTTTCCCTCGAAGGATCTACTTCAACGGCGACAACTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCGCGGCAAGAGGTTTCATTGTTTGCTTTAGCAATCGCCTCCTTGGCAGTCTTAGTATTCTATGTATATGTTTAA 1338 0.4245 MGFSFLSKPTPCILFFFLLSFTSTDAYDPLDPNGNITIKWDIIQWTPDGYVATVTMNNFQQYRHIASPGWSLGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTMAVGAFQISVGRAGTTNKTVKVPKNFTLNAPGPGYTCGPAKIVRPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQSNSSQSGTCVNPNTPHLASVVSGNGKNNLSPLVQCTSHMCPIRIHWHVKVNYKEYWRVKVSITNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNYKSLNPYGLINDTAMLWGVKFYNDFLNHAGPSGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALAIASLAVLVFYVYV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00349 445 PANTHER PROTEIN COBRA 15 434 IPR006918 GO:0010215|GO:0016020
Mepo3g00349 445 PIRSF COBRA 4 445 IPR006918 GO:0010215|GO:0016020
Mepo3g00349 445 Pfam COBRA-like protein 50 213 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00349 Mepo-Chr3 4698687 4702572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00349 13 442 COBRA Gene Family AT3G02210 75.576 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00349 - - gmx:100783820 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00349 3 4698687 4702572 Mepo3g00349 3 4698687 4702572 ECH
Mepo5g03484 5 43087711 43091422 Mepo3g00349 3 4698687 4702572 PCT
Mepo3g00349 3 4698687 4702572 Mepo5g03485 5 43091714 43096043 PCT