Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00344 ATGAACCGAGGCCGGCTTGATTTTTTTGTACCTCCCTTGGTTATCAAACGGAACTCTCGTGTAGGAAATATGCTTGCAAAATATTCAAAGCATAGAAGTTCGTCCAAGAAACAATGTTCAACATTTATAAAAGAGCTATGCCATGAGTTTTCTCTGGACGATCTTAAGAAAGCTACCAATAACTTTGATGAAAACCGAAAAATTGGAGAAGTAAACGGCAATATAGTGTACAAAGGTTATGTCAAACATAATGGTGAAAATGATTATCCAATAGCATTGTTGCGGATGAGAAATAGAGTCAAGGAACAACACTTCAAGAATGAAATTGAACTCCACTGCCAGCTTTGTCACCCAAATTTGATATATTTGATAGGATTTTGTGACCAAAAAAATGAGAAAATTCTCGTCTATAAAAAAGATGAAATGGTCAATGGCTCTCTCCATGATCACTTATGTTCATGGGATATGGAATCACTCTCGTGGAAGAAAAGGCTTGAAATATGCATTGGAGCTGCAAAAGGACTACACTATCTTCACACAGGAACAAAGCGCCCGATTTTCCACCGTGACGTAAAGCCTCACAACATTCTTTTAGATAACAATATGGCACCAAAACTCTCGCAATTTGGATTATCCTTACAAGGGAAGCTTTCAAAATCGGAGTCAATACCAATTGAACTCGACAACATTTCTGGTACAATAGGTTTCCTTGCACCAGAGTATATGATAACCGGAATTTACACAGATAAATGTGACGTTTACTCCTTTGGTATGGTTCTATTTCAAGTAATTTCATGCATAAACGACTATTACACCATCATGATTGAGAAGATGCTGATAGAGGATCGAAATGGAATTTTAGAACCAAATAAAAGACGATTAGAAGATGAGTCAGATTTATTTAATCCAGCATTAGAGAGGTTCCTAGTTGATGAAATTATTGATCCAATTCTCACAAGATTGATTTCACCGGAATGTTTGGCAGTGTTCATGAATATCATGAAAAGATGTTTGAATACAGAAGAACCAAATGAGAGACCAACAATGGGCGAGGTTGAGGTTGAACTTGAGCATGCTCTGGCACTGCAGGAGGAAGCAGAGTGTGTGACAAGTATAACTTTTTTCCCACCAACTAATGGTGCCCTAAAACTTTTGTGA 1158 0.3739 MNRGRLDFFVPPLVIKRNSRVGNMLAKYSKHRSSSKKQCSTFIKELCHEFSLDDLKKATNNFDENRKIGEVNGNIVYKGYVKHNGENDYPIALLRMRNRVKEQHFKNEIELHCQLCHPNLIYLIGFCDQKNEKILVYKKDEMVNGSLHDHLCSWDMESLSWKKRLEICIGAAKGLHYLHTGTKRPIFHRDVKPHNILLDNNMAPKLSQFGLSLQGKLSKSESIPIELDNISGTIGFLAPEYMITGIYTDKCDVYSFGMVLFQVISCINDYYTIMIEKMLIEDRNGILEPNKRRLEDESDLFNPALERFLVDEIIDPILTRLISPECLAVFMNIMKRCLNTEEPNERPTMGEVEVELEHALALQEEAECVTSITFFPPTNGALKLL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00344 385 SUPERFAMILY Protein kinase-like (PK-like) 36 355 IPR011009 -
Mepo3g00344 385 SMART serkin_6 62 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00344 385 Gene3D Phosphorylase Kinase; domain 1 21 138 - -
Mepo3g00344 385 ProSiteProfiles Protein kinase domain profile. 62 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00344 385 Pfam Protein tyrosine and serine/threonine kinase 65 278 IPR001245 GO:0004672|GO:0006468
Mepo3g00344 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Mepo3g00344 385 PANTHER OS07G0166700 PROTEIN 46 363 IPR045272 GO:0004714|GO:0006468
Mepo3g00344 385 Gene3D Transferase(Phosphotransferase) domain 1 142 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00344 Mepo-Chr3 4647619 4649930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00344 19 367 Receptor kinase-like Gene Family AT3G51550 37.960 5.28e-62 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo3g00344 PK_Tyr_Ser-Thr 2.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00344 - - mtr:25497582 410.223