Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00341 ATGCAGGCTTGGTTTTTTTGTACCTCCCTTGGTTATCATTGGCTATCAAGCGGAATTCGTGTGGGAAATATGCTTGCAAAATACTTAAAGCATAAAAGTTCGTCCAAGAAACAATGTTCAACATTTATAAAAGAGCTATGCCATGAGTTTTCTCTGGACGATCTTAAGAAAGCTACCAATAACTTTGATCAAAATCGAAAAATTGGAGAAGTAAGCCGCAATATAGTGTACAAAGGTTATGTCAAACATAATGGTGAAAATGATTATCCAATAGCATTGTTGCGGATAAAAGATGTATTCATGGAGTTCAATTTCATTTATTTCATTCATTTCATGAATGAAATTGAACTCCACTGCCAGCTTTGTCACCCAAATTTGATATCTTTGATAGGATTTTGTAAACAGGAAAATGAGAAAATTCTCGTGTATAAGAAAGATGAAATGGTCAATGGCTCTCTTCATGATCACTTATGTTCAAGGGATATGGAATCACTCTCTTGGAAAAAAAGGCTAGAAATATGCATTGGAGCTGCAAAAGGACTACACTACCTTCACACCGGAGCAAAGCGCCTGATTTTCCACCGTGACGTACAACCTCGAAACATTCTTTTAGGTAACAATATGGAACCAAAACTCTGCCAACTTGGATTATCCTTACAAGGGAAGCTTTCTAAATCGGAGTCAAAACCAATTCAAGTTGACCATATTTGGGCTACATGGGGTTTCAGTGCACCAGAGTATGTGCTAACCGGAACTTTCACAGATAAATGCGACGTTTACTCCTTTGGTATGGTTCTATTTCAAGTAATTTCATGCATAAACGACTTTATCACCATGATTGAGAAGATGAACATGTTAGAGGAACGAAATGGATTTTAG 879 0.3686 MQAWFFCTSLGYHWLSSGIRVGNMLAKYLKHKSSSKKQCSTFIKELCHEFSLDDLKKATNNFDQNRKIGEVSRNIVYKGYVKHNGENDYPIALLRIKDVFMEFNFIYFIHFMNEIELHCQLCHPNLISLIGFCKQENEKILVYKKDEMVNGSLHDHLCSRDMESLSWKKRLEICIGAAKGLHYLHTGAKRLIFHRDVQPRNILLGNNMEPKLCQLGLSLQGKLSKSESKPIQVDHIWATWGFSAPEYVLTGTFTDKCDVYSFGMVLFQVISCINDFITMIEKMNMLEERNGF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00341 292 Gene3D Phosphorylase Kinase; domain 1 21 144 - -
Mepo3g00341 292 Pfam Protein tyrosine and serine/threonine kinase 64 285 IPR001245 GO:0004672|GO:0006468
Mepo3g00341 292 PANTHER OS07G0166700 PROTEIN 46 272 IPR045272 GO:0004714|GO:0006468
Mepo3g00341 292 ProSiteProfiles Protein kinase domain profile. 62 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00341 292 SUPERFAMILY Protein kinase-like (PK-like) 38 272 IPR011009 -
Mepo3g00341 292 Gene3D Transferase(Phosphotransferase) domain 1 148 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00341 Mepo-Chr3 4630394 4632978 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00341 33 272 Receptor kinase-like Gene Family AT5G38990 42.387 6.00e-50 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo3g00341 PK_Tyr_Ser-Thr 3.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00341 - - mtr:25497582 305.064