Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00339 ATGCTTGCAAAATATTCAAAGCATAGAAGTTCGTCCAAGAAACAATGTTCAACATTTATAAAAGTGCTATGCCATCAATTTTCTCTGGACGATCTTAAGAAAGCTACCAATAACTTTGATGAAGATCGAAAAATTGGACAAGTAAACGGCAATATAGTCTACAAAGGCTATGTCAAATATAATGGTGAAAATGATTATCCAATAGCATTGTTGCGGATAAGGCGTATACTCATCGAACGAGAGTTCAAGAAGCAAATAGAATTCCACTGCCAGCTCTGTCACCCAAATTTGATATCTTTGATAGGATTTTGTGACCAAAAAAATGAGAAAATTCTCGTGTATAAAAAAGATGAAATGGTCAATGGTTCTCTCCGTGATCACTTATGTTCACGGGATATGGAATCACTCTCATGGAAGAAAAGGCTTGAAATATGCATTGGAGTTGCAAAAGGACTACACTATCTTCACAAAGGAGCAAAGCGCCCGATTTTCCACCGTGACTTAAAGCCTAGCAACATTCTTTTAGATAACCATATGACACCAAAACTCAGGCAACTTGGATTTTCCTTACTAGGGAAGCTTTCTAAATCGGAGTCAATACCAATTAAAGCCGAACTTTGTGGTACATTGGGTTTCATTGCACCCGAGTATGTGCTAACCGGAACTTACACAGATAAATGCGACGTTTACTCCTTTGGTATGGTTCTACTTCAAGTAATTTTATGCATAAACGACTATTACACCATCTTTGATAAGATGATCATGTTAGAGGAACGAAATGGGATTTTAGAACCAGATAAAAGACGATTAGAAGATGAGTCAGATTTATTTAATCCAGCAAACTTTTTAGAGAGGTTCCCAGTTGATGAAATGATTGATCCAATTCTCACGAGATTGATTTCACCGGAATGTTTGGCAGTGTTCGTCAATATCATGAAAAGATGCTTGAATAGAGAAGAACCAAATGAAAGACCGGCTATGGGTGAGGTCGAGGTTGAACTTGAGCATGCTTTGGCGCTGCAGGAGGAAGCAGAGCGTGTGACAAGTATAACTTTTTTCCCACCAACTAATGGTGCCCTAAAACTTTTGTGA 1092 0.381 MLAKYSKHRSSSKKQCSTFIKVLCHQFSLDDLKKATNNFDEDRKIGQVNGNIVYKGYVKYNGENDYPIALLRIRRILIEREFKKQIEFHCQLCHPNLISLIGFCDQKNEKILVYKKDEMVNGSLRDHLCSRDMESLSWKKRLEICIGVAKGLHYLHKGAKRPIFHRDLKPSNILLDNHMTPKLRQLGFSLLGKLSKSESIPIKAELCGTLGFIAPEYVLTGTYTDKCDVYSFGMVLLQVILCINDYYTIFDKMIMLEERNGILEPDKRRLEDESDLFNPANFLERFPVDEMIDPILTRLISPECLAVFVNIMKRCLNREEPNERPAMGEVEVELEHALALQEEAERVTSITFFPPTNGALKLL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00339 363 Gene3D Transferase(Phosphotransferase) domain 1 119 352 - -
Mepo3g00339 363 SUPERFAMILY Protein kinase-like (PK-like) 15 345 IPR011009 -
Mepo3g00339 363 SMART serkin_6 39 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00339 363 Gene3D Phosphorylase Kinase; domain 1 2 115 - -
Mepo3g00339 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Mepo3g00339 363 PANTHER OS07G0166700 PROTEIN 23 341 IPR045272 GO:0004714|GO:0006468
Mepo3g00339 363 ProSiteProfiles Protein kinase domain profile. 39 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00339 363 Pfam Protein kinase domain 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00339 Mepo-Chr3 4603144 4604940 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00339 10 346 Receptor kinase-like Gene Family AT5G38990 38.617 1.11e-60 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo3g00339 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00339 - - mtr:25497582 405.601