Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00333 ATGTTCTCTGAAGAAGGAACCTCTCGAATTGAAAGAGTTAATCTTTCGATCAAGCTACAACAATTACCAAAAAATATGTTCACAAGATATCTTGATGTTACATTGAATGGAATTGAGATTTTTAAAATAAATGATAAAAATAATAATCTCTTTGGATCGAATCCAAAACCCATTATTTTATCTCCCAAAGAAGTTTTACCAACTCAAAAATCAAAGAAATCAACCATAGTTATCCTTGTTGTGGTTGTAGTTTCATGTCTTATGCTAGCAGCTGTTATTGGAATTCTAGTTTTTGTTCGAAGGAGAAGAAGATTTGAATCTCAAATTGATAGGGGAGAAATTTCATGCAAGAGAAAGAAAGAGGATTCATCGGCTTTACCATCCCATTTGTGCCGCTATTTTACAATAGCAGAGATAAGAGCCGCTACAAACAACTTCGAAGATGTTTTTATCATTGGAGTTGGAGGGTTTGGCAATGTGTACAAAGGTTATATTGATGGAGACATACCTGTTGCGATAAAACGTCTTAAACCAGGTTCTCAACAAGGTGTAAATGAGTTCATGAATGAGATCGAGTTACTCTCTCAGCTTCGTCATATTCACTTGGTTTCCCTCATTGGATATTGCAACGAAGGAAAGAAAGGTTTATGTGGGTCCCATGCCAAAAACGTTTCTCTCCAAATTGGTGAGGAAATGGCTGGGAATCGATAG 711 0.3601 MFSEEGTSRIERVNLSIKLQQLPKNMFTRYLDVTLNGIEIFKINDKNNNLFGSNPKPIILSPKEVLPTQKSKKSTIVILVVVVVSCLMLAAVIGILVFVRRRRRFESQIDRGEISCKRKKEDSSALPSHLCRYFTIAEIRAATNNFEDVFIIGVGGFGNVYKGYIDGDIPVAIKRLKPGSQQGVNEFMNEIELLSQLRHIHLVSLIGYCNEGKKGLCGSHAKNVSLQIGEEMAGNR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00333 236 ProSitePatterns Protein kinases ATP-binding region signature. 152 174 IPR017441 GO:0005524
Mepo3g00333 236 Pfam Protein tyrosine and serine/threonine kinase 152 214 IPR001245 GO:0004672|GO:0006468
Mepo3g00333 236 ProSiteProfiles Protein kinase domain profile. 146 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00333 236 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 226 - -
Mepo3g00333 236 Gene3D Phosphorylase Kinase; domain 1 108 217 - -
Mepo3g00333 236 FunFam receptor-like protein kinase FERONIA 108 216 - -
Mepo3g00333 236 SUPERFAMILY Protein kinase-like (PK-like) 123 213 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00333 Mepo-Chr3 4546568 4549606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00333 30 211 Receptor kinase-like Gene Family AT3G51550 45.411 2.32e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo3g00333 PK_Tyr_Ser-Thr 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00333 - - lja:Lj0g3v0259209.1 226.868