LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g00330	ATGGCAAACTCCAGAAACCACAAATGTCAATGTAACACCACCCTTCTACACTTCCTTTTCCTTCACCTATTATTTCCTCTTATTGCCAATTCATACAACCCTGATTACAGTTTAGCCATCACTTGTGGCTCCTCAACAAACACTACTGCCTTAGATGGAAGAATTTGGGTTGTTGATAACATTGATAACTCTAATCTCTTTTCCTTCAATGAACCAAAAAACACAAATCATTCTCTTGAAACAAAACCTAATTCCATTTCAAATATCCCATTGCAATTCACAACCGCACGTGCCTCTCTCTCAAATTTCACATACTCATTTTCTAACATCATCACTAACTCCCCTATTTTTCTTCGCCTTCATTTTTACCCAACTTCATATCAAAATTTTGAAACCTCAATTGCACTTTTCTCTGTTGAAGTAAACAACAACATTACCCTTCTTGAAAACTTCAACCCTTCACTTTGGCTTCATCGTGATGAAAATCATATTGTCAAAGAATATTGCATCCAAATCAAACCAAATGAGAAGCTAAACATAACTTTTATTCCCAACAACAATAACAAATCGAATCCTTGTTATGCTTTCATTAACGGAATCGAAGTTGTGTCTATGCCTTCTTTTCTCTATTACACAAACCTCAGTGACCAAGATTATCGTATCAATTTACCTGGTTTTGACAACAGGGAATACCAAGTTCTTAATGACAAAGCTTTAGAGATGGTTTATAGAGTCAACGTTGGTGAAAATCAAGTTCCAGCAAACCATGATACAGGCATGTTTCGTAATTGGGACAATGATTCTCCTCGTTACTTGGAGAAAGAGAACCCATCTAGTGTATCAAGTGACATTACACATAACCTAACATATTTAAACAATACCATTCCAAATTACACTGCACCAGAAGCTGTTTACTTAACTGCAAGAAGTTACGGAATGTATGAGACAAAGGATTATAATGTAACTTGGAACTTTGAAGTTGATTCTGCTTTTACTTATATGGTAAGGTTACATTTTTGCGAGTTTGATTGGCATATAAAACAGGATGGTGATAGAATTTTTCAGATTTATATAGATGATAGTTTGGCTGAACCAAGTGCTGATGTGATAAGGTGGAGTGGTGCTCCTTTTGTTCCTGTTCATAAGGATTATGCCGTGACTATGGGCGGAAGCTCTCGAATTGAAAAAGTTAATCTTTCGATCAAGCTACAACGATTACCAAAATCTATGCCTACTGTATATCGTGATGTCACGTTGAATGGAATCGAGATTTTGAAAATAAGTGATAAAAATAATCTCTTTGGAGTGAATCCAAAACCCATGTCTGAATCTCCCAAGGAACAAGTTTTACCAACTCAACAATGGAAGAAATCAACAAAAGAAACCCTTGCTGTGGTTGCTGTTTCATGTCTCATTCTAGCATCTGTTGTTGGAATAACAGTTTTTGTTAGACGGAATATAATATTTCATTCTCATACTGAAATGGAAGAAACTTCATGCAAGACAAAGAAAGAAGGTTCCTCAATTTTACCATCCTATTTGTGCCGCTATTTTACTATAGCAGAAATAAAAGTGGCTACAAACAACTTCGATGATATTTTTATCATCGGGGTTGGAGGGTTCGGCAATGTGTACAAAGGTTATATTGATGGAGTTACACCAGTTGCGATAAAACGTCTTAAATCGGGTTCTCAACAAGGTGTAAACGAGTTCTTGAATGAGATTGAGTTGCTCTCTCAGCTTCGTCACATTCACTTGGTTTCACTTATTGGATATTGCAATGAAGGTGTAGAGATGATTCTTGACTTCATGCAACGTGGCAGTCTATGTGAATATCTTTATGGATCAGATAACGAACCTCTTACTTGGAAGCAGAGGCTTGAGATTCTATTAGGTGCCGCGCGGGGGTTGCATTATCTGCATGCAGGTGCAAAGCACAATATCATACACCGTGATGTGAAGAGTACAAACATATTGTTGGATGAGAAATGGGTGGCTAAGGTTTCTGATTTTGGGTTATCAAAAGTGGGACCTACGGGGATGTCGATGACCCATGTCAGCACTATGGTGAAAGGTAGTCTGGGGTATTTGGATCCAGAATACTACATGCGACAAAGGTTGACTCTAAAGTCTGATGTGTACTCTTTCGGTGTTGTGCTTCTTGAGGTGTTGTGTGCGAGACCCCCATTGGTTCGTTCTTTGGATAAGAAAAAAGCAAGTTTGGCTGTTTGGTTTCAAACATGTTACAATGAAGGTGTGATCATTGAAGAGATGGTCGACCCGTTCATAAAGGATTCTATAACAAGTGAGAGTTTGAAATGTTATTGTCAAATGGTGTTGAGCTGTTTGCATGATGACGGAAATCAACGAATGTCGATGAGTGATGTGGTTGGGACATTAGAGTTTGCATTGCAGTTGGAGATGAGTGGGGAGGATACTAAGTTTGTTTGGACTCATGAAAAGGAAAAAAGTGAGGAAAGACAACAAGTGTCGCAGTTTACAAGTGAAGATGGAAGTGATGTTCGTTTCACAAGTAGCAGTGATGATTATGAGACTCAAACAAGCAAGGCAAGCACCAATTCAGGCAGTACTGAAGAACAGCCTTTGTTTTCTGCAACGGTGTTTTCTCAGATTGGGAATCCAAGAGCACGATAG	2655	0.3823	MANSRNHKCQCNTTLLHFLFLHLLFPLIANSYNPDYSLAITCGSSTNTTALDGRIWVVDNIDNSNLFSFNEPKNTNHSLETKPNSISNIPLQFTTARASLSNFTYSFSNIITNSPIFLRLHFYPTSYQNFETSIALFSVEVNNNITLLENFNPSLWLHRDENHIVKEYCIQIKPNEKLNITFIPNNNNKSNPCYAFINGIEVVSMPSFLYYTNLSDQDYRINLPGFDNREYQVLNDKALEMVYRVNVGENQVPANHDTGMFRNWDNDSPRYLEKENPSSVSSDITHNLTYLNNTIPNYTAPEAVYLTARSYGMYETKDYNVTWNFEVDSAFTYMVRLHFCEFDWHIKQDGDRIFQIYIDDSLAEPSADVIRWSGAPFVPVHKDYAVTMGGSSRIEKVNLSIKLQRLPKSMPTVYRDVTLNGIEILKISDKNNLFGVNPKPMSESPKEQVLPTQQWKKSTKETLAVVAVSCLILASVVGITVFVRRNIIFHSHTEMEETSCKTKKEGSSILPSYLCRYFTIAEIKVATNNFDDIFIIGVGGFGNVYKGYIDGVTPVAIKRLKSGSQQGVNEFLNEIELLSQLRHIHLVSLIGYCNEGVEMILDFMQRGSLCEYLYGSDNEPLTWKQRLEILLGAARGLHYLHAGAKHNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGMSMTHVSTMVKGSLGYLDPEYYMRQRLTLKSDVYSFGVVLLEVLCARPPLVRSLDKKKASLAVWFQTCYNEGVIIEEMVDPFIKDSITSESLKCYCQMVLSCLHDDGNQRMSMSDVVGTLEFALQLEMSGEDTKFVWTHEKEKSEERQQVSQFTSEDGSDVRFTSSSDDYETQTSKASTNSGSTEEQPLFSATVFSQIGNPRAR	884

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g00330	884	SMART	serkin_6	530	803	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00330	884	ProSitePatterns	Protein kinases ATP-binding region signature.	536	558	IPR017441	GO:0005524
	Mepo3g00330	884	FunFam	receptor-like protein kinase FERONIA	491	604	-	-
	Mepo3g00330	884	FunFam	Receptor-like protein kinase FERONIA	604	823	-	-
	Mepo3g00330	884	FunFam	FERONIA receptor-like kinase	237	428	-	-
	Mepo3g00330	884	Pfam	Protein tyrosine and serine/threonine kinase	536	798	IPR001245	GO:0004672\|GO:0006468
	Mepo3g00330	884	Gene3D	-	237	428	-	-
	Mepo3g00330	884	Gene3D	-	34	206	-	-
	Mepo3g00330	884	Pfam	Malectin-like domain	40	426	IPR024788	-
	Mepo3g00330	884	FunFam	FERONIA receptor-like kinase	37	206	-	-
	Mepo3g00330	884	Gene3D	Transferase(Phosphotransferase) domain 1	604	824	-	-
	Mepo3g00330	884	Gene3D	Phosphorylase Kinase; domain 1	490	603	-	-
	Mepo3g00330	884	MobiDBLite	consensus disorder prediction	819	884	-	-
	Mepo3g00330	884	CDD	STKc_IRAK	536	801	-	-
	Mepo3g00330	884	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	648	660	IPR008271	GO:0004672\|GO:0006468
	Mepo3g00330	884	ProSiteProfiles	Protein kinase domain profile.	530	803	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00330	884	MobiDBLite	consensus disorder prediction	831	878	-	-
	Mepo3g00330	884	SUPERFAMILY	Protein kinase-like (PK-like)	506	803	IPR011009	-
	Mepo3g00330	884	PANTHER	OS03G0124300 PROTEIN-RELATED	16	486	IPR046957	GO:0004672

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g00330	Mepo-Chr3	4503700	4506557	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g00330	29	884	Receptor kinase-like Gene Family	AT3G51550	43.063	0.0	614

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mepo3g00330		Malectin_like	1.1e-34	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g00330	-		-	mtr:25497555	1054.66