LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g00323	ATGAAAATCAGCAAACTATCTCTCCTTTTGCTATTGTTCCCTCTAGTTGCTACCTCATACAATCCAATTTACAATTTAGCCATTAGTTGTGGTTCCTCGATAAACACTACTGCCTTAAATAATCGAACTTGGGTTGGTGATAATACTGTTAACTCCAATCTCTTTACTTTCATTGAACCAAAAACCACTAACCCATCTCTTAAAGCACAACCTAATTACCTTTCAAATGTCCAAGTTCCATACACATCTGCCCGTGTCTCTCTCTCAAATTTCACATACTCATTTTCTAGCATCACTAACTCCCCTGTTTTTCTTCGCCTTCACTTTTACCCAATTTCATCTAAAATCTTTGATCCCTCCAATGCAATTTTCTCTGTCAAAGTTAACAACAACCTTACCCTTCTTAAAAACTTTAACCCTTACCTTTGGATTCATGAAGATGGGGAAACAATCACCAAAGAATTTTGTATCCAAATCAACCCAAATGAGAAGCTAAACATAACTTTCATTCCCAACAACACAAACCAACCAAATCCTTATTATGCTTTCATTAATGGAATCGAAGTCGTGTCCATGCCTTCTTATCTCTATTACACAAATCTCAGTGACACAAATTATCATTTGAAATCACTTGATATAGACAACACAAAATACCAAATTCAGAGCAACAAAGCTTTGGAGACTGTTTATAGAGTCAACGTTGGTCAAAATCAAGTTCCACCAAACCAAGATACTGGTATGTTTCGTCATTGGGACAATGATTTTCCTCTTTACTTGGAGAAACAATATCCATACAGTCTATCAGATGATTATTATGACATTCATCCAAACTATTTAAACAATACCATTCCAAATTACACTGCACCAGAAGCTGTATACTTCACTGCAAGAAGTTATGGAATAAAATTATCACAAAATGTTTTTAAACCCCCACTTAATGGGGACACTTTGGACACTTTGGACACTTTGACTTATGACTATAATGTAACTTGGAATTTTGAGGTTGATTCTTCTTTTACCTATATGGTAAGGTTACATTTTTGTGAGTTTGATCCACGTATCAAGAATAAAGGTGATAGAGTTTTTCAGATTTTCATACATGGCACTTTGGCTGAGGAAAACGCTGATGTGATAATGTGGAGTGGTGCTCGTATGGTTCCTGTTCATAGGGATTATGTTGTGACTATGGATTCTCGTAGAGGAAGCTCTCAAATTGAAAGAGTTAATCTTTCAATCAATCTTCAACCATTATCAAGCGACTATACATATCACAGGGATGTCACATTAAATGGGATCGAGATTTTCAAAGTAAGTGATAAAAATAATAATCTCGCGGGGTCGATACCAAAGTTGATAAATATATCTCACCCGCCTAAATTATTTCCAACCCAATCATCAAAAAAATCTATCTCACGCACATCAAGCATCTCCATAGTTATCGTTGTTGCGATTGCAATTTCAAGCCTAATGTTTGCAACTGTCATAGGCATCACAGGTTTTTTGCTAAGGAAAAGGATTAACAATGCCATGAAAGATAACTCATCGAAGACAGAGAACAAAGGGTCACCACCTTTGCCACCCCATTTGTGTCGCTCCTTTACAATCGCAGAGATCAAAGCAGCCACAAACAACTTCGATGATGATTTCATCATCGGTGTTGGAGGGTTTGGAAACGTGTACAAAGGTTGCATCGATGGATCTACATGTGTTGCAATAAAACGCCTCAAATCAGGCTCTCAACAAGGTGCGAACGAGTTCATGAATGAAATCGAGTTGCTCTCCCAGCTTCGCCACATTCACTTGGTGTCCCTTGTGGGATACTGCAATGACAACACAGAGATGATTTTGGTTTATGAGTTCATGAAGCACGGTACTCTCTGCGAGTATCTTTATGGTTCTAATAATCAGCCACTATCGTGGAAGCAGAGGCTTGAGATTCTTTTGGGTGCAGCTAGAGGGTTGCATTATCTTCATGATGAGGTGAAACATAAGATAATACATCGTGACGTAAAGAGCACCAATATATTGTTGGATGAGAAATGGGTAGCTAAGGTTTCTGACTTCGGGTTATCCAAGGTAGGACCCACGGGGATATCGACTACCCACGTTAGCACGATGGTGAAGGGAAGCCTTGGGTATTTAGATCCTGAGTACTATATGTTCCAAAGGCTAACTCTAAAATCAGATGTGTACTCGTTCGGTGTTGTACTTCTTGAAGTGTTGTGTGCTAGGCCACCTTTGGTTCGCGATTTGGATAAGAATACAGCTAGTCTAGTATGTTGGTTTAAAAAATGCTACGATGAAGGTGTGGCTATTGAACAAACAGTGGACCCATTTCTAAGAGACTCTATACCGGGTGAGTGTTTGGAATATTATTGTAAGTTGGCATTAAGTTGTTTGCATGATGATGGAACTCAACGACTCTCAATGAGTCAAGTGGTTGGGGGTTTAGAGTTTGCATTGAAATTGCTGGTGAGTGAGGAAGATAGCCAGGTTGATACGACCCAAAAAGAGAGGACATATATGAGTAATGAAGAGAGTGACTTGCATTTCAGTAGATCCCACACCTACAAGGAGAGCACTATCTCAACGAGGCCAAGTACTCAAGAACAACCTTTCTCTAGGATTGGGAATCAAAGAACACGTTCATATTCATGTCAAAACTTCAAAATTTATATTTAG	2682	0.3863	MKISKLSLLLLLFPLVATSYNPIYNLAISCGSSINTTALNNRTWVGDNTVNSNLFTFIEPKTTNPSLKAQPNYLSNVQVPYTSARVSLSNFTYSFSSITNSPVFLRLHFYPISSKIFDPSNAIFSVKVNNNLTLLKNFNPYLWIHEDGETITKEFCIQINPNEKLNITFIPNNTNQPNPYYAFINGIEVVSMPSYLYYTNLSDTNYHLKSLDIDNTKYQIQSNKALETVYRVNVGQNQVPPNQDTGMFRHWDNDFPLYLEKQYPYSLSDDYYDIHPNYLNNTIPNYTAPEAVYFTARSYGIKLSQNVFKPPLNGDTLDTLDTLTYDYNVTWNFEVDSSFTYMVRLHFCEFDPRIKNKGDRVFQIFIHGTLAEENADVIMWSGARMVPVHRDYVVTMDSRRGSSQIERVNLSINLQPLSSDYTYHRDVTLNGIEIFKVSDKNNNLAGSIPKLINISHPPKLFPTQSSKKSISRTSSISIVIVVAIAISSLMFATVIGITGFLLRKRINNAMKDNSSKTENKGSPPLPPHLCRSFTIAEIKAATNNFDDDFIIGVGGFGNVYKGCIDGSTCVAIKRLKSGSQQGANEFMNEIELLSQLRHIHLVSLVGYCNDNTEMILVYEFMKHGTLCEYLYGSNNQPLSWKQRLEILLGAARGLHYLHDEVKHKIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGISTTHVSTMVKGSLGYLDPEYYMFQRLTLKSDVYSFGVVLLEVLCARPPLVRDLDKNTASLVCWFKKCYDEGVAIEQTVDPFLRDSIPGECLEYYCKLALSCLHDDGTQRLSMSQVVGGLEFALKLLVSEEDSQVDTTQKERTYMSNEESDLHFSRSHTYKESTISTRPSTQEQPFSRIGNQRTRSYSCQNFKIYI	893

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g00323	893	MobiDBLite	consensus disorder prediction	852	877	-	-
	Mepo3g00323	893	Pfam	Malectin-like domain	28	437	IPR024788	-
	Mepo3g00323	893	Gene3D	Phosphorylase Kinase; domain 1	505	620	-	-
	Mepo3g00323	893	Gene3D	-	24	193	-	-
	Mepo3g00323	893	Gene3D	-	224	439	-	-
	Mepo3g00323	893	Gene3D	Transferase(Phosphotransferase) domain 1	621	846	-	-
	Mepo3g00323	893	Pfam	Protein tyrosine and serine/threonine kinase	551	814	IPR001245	GO:0004672\|GO:0006468
	Mepo3g00323	893	PANTHER	OS03G0124300 PROTEIN-RELATED	7	490	IPR046957	GO:0004672
	Mepo3g00323	893	FunFam	Receptor-like protein kinase FERONIA	621	840	-	-
	Mepo3g00323	893	FunFam	FERONIA receptor-like kinase	25	193	-	-
	Mepo3g00323	893	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	30	-	-
	Mepo3g00323	893	SMART	serkin_6	545	820	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00323	893	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	665	677	IPR008271	GO:0004672\|GO:0006468
	Mepo3g00323	893	ProSiteProfiles	Protein kinase domain profile.	545	820	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00323	893	MobiDBLite	consensus disorder prediction	856	877	-	-
	Mepo3g00323	893	FunFam	receptor-like protein kinase FERONIA	505	620	-	-
	Mepo3g00323	893	SUPERFAMILY	Protein kinase-like (PK-like)	520	819	IPR011009	-
	Mepo3g00323	893	CDD	STKc_IRAK	551	814	-	-
	Mepo3g00323	893	ProSitePatterns	Protein kinases ATP-binding region signature.	551	573	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g00323	Mepo-Chr3	4406484	4409215	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g00323	15	829	Receptor kinase-like Gene Family	AT3G51550	44.156	0.0	597

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mepo3g00323		Malectin_like	3e-30	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g00323	-		-	mtr:25497555	1231.85