Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00322 ATGCCTTCTTTTCTCTATTTCGCAAACCTCAGTGACACAAATTATCATTTGAAATCACTTGATATAGACAACACAGAATACCAAATTCAGAGCAACAAAGCTTTGGAGACGGTTTATAGAGTCAACGTCGGTGAGAGTCAAGTTCCACCGGGTAACAATACTGAAGCTGTTTACTTAACTGCAAGAAGCTATGGAATGTATGCCACAGAGGATTACAATGTAACTTGGAATTTTGAAGTTGATTCTTCTTTTACTTATATGGTAAGGTTACATTTTTGTGAATTTGATCAGCTTATCAACATTATTGGTGATAGAGTTTTTCAGATTTTTTTAAATGATATCATGGCAGAAGAACATGCTGATGTGATTACATGGGCTGGTGCACGTTTGGTTCCTGTTCATAAGGATTATGCTGTGACTATGTACTCTCAAAATGGAAGCTCTGAAATTGAAAGAGTTAATCTTTCAATTATGCTTCAACGATTACCAAAGAGTACCATATCAAGTTATCGTGACGTTCTATTGAATGGAATCGAGATTTTCAAAGTAAGTGATAAAAAAAAAAATCTGGCAGGACCTATCTCTCCCATGCATCAGCAATTTTCAACCCAAACGTCCAAAAAAATTAAGATCTCCAGAACTACCGTGGTTGCGAGTGTGGTTTCAGGCCTCCTGCTAGCAATTATGGTGGGTATCGTAGTTTTTTGGCTAAGGAGAAGGTTTCAAGATGCCATGGCAGATAACTTGTCGAAGACAAAGAACATAGAGTTATCATCCTTGCCGCCCCACTTGTGCCGCTACTTTACAATTGCAGAGATCAGAGCAGCCACAAACAACTTTGATGATGTTTTCATCATCGGAGTTGGAGGGTTTGGCAACGTGTACAAAGGTTTTATTGATAGATCCACACCTGTTGCGATAAAACGCCTTAAATCGGGCTCTCAGCAAGGTGCCAACGAGTTCATCAACGAGATTGAGTTGCTCTCCCAGCTTCGCCACATTCACTTAGTCTCCCTCGTGGGATATTGCAATGACGACAGAGAGATGATTCTGGTTTATGAGTTCATGCAGCACGGTACTCTTTGTGAATATCTCTATGGCTCCAATAAGCAACCCCTACCGTGGAAGCAAAGGCTTGATATTCTATTGGGTGCTGCGAGAGGGTTGCATTATCTTCATGCTGAGGTGAAACACAAGATAATACACCGTGACGTGAAGAGCACCAACATATTGTTGGATGAGAAATGGGTGGCTAAGGTTTCTGATTTTGGTTTATCGAAGGTGGGACCGACAGGGATATCAACTACCCATGTTAGCACAATGGTGAAGGGTAGCCTTGGGTATTTGGATCCCGAATACTATATGCTCCAAAGGCTAACATTAAAATCTGATGTATACTCGTTCGGTGTGGTGCTTCTTGAGGTGTTGTGTGCTAGACCACCTTTGGTTCGTGATTTGGATAAGAATACAGCCAGTCTAATTTGTTGGTTTAAAAAATGCTACGATGAAGGTGTGGCGATTGAACAAATAGTGGATCCATTCCTAATGGATTGTATCACAGAGGAGTGCTTGAAATATTATTGCAAGTTGGCGTTGAGTTGTTTGCATGATGATGGGACTCAACGACCCTCAATGAGTCAAGTAGTTGTAGGTTTAGAGTATGTGTTGCAGATGGAGGTGAGTGAAGACGGTAGCCAACAATTCTCGCAGTTTATGAGTGACGAAGAGAGTGACCATCATTCTGCAAGATCCCACACCTACAAGGAGAGCACAGCCTCAGCGATGGCAAGTACTCAAGAACATTCTTTGTCCAACATTGTGAATCCAAGACCACGATCGTATTCATGTCAAAACCTCAAAGTTTATATTTAG 1872 0.4119 MPSFLYFANLSDTNYHLKSLDIDNTEYQIQSNKALETVYRVNVGESQVPPGNNTEAVYLTARSYGMYATEDYNVTWNFEVDSSFTYMVRLHFCEFDQLINIIGDRVFQIFLNDIMAEEHADVITWAGARLVPVHKDYAVTMYSQNGSSEIERVNLSIMLQRLPKSTISSYRDVLLNGIEIFKVSDKKKNLAGPISPMHQQFSTQTSKKIKISRTTVVASVVSGLLLAIMVGIVVFWLRRRFQDAMADNLSKTKNIELSSLPPHLCRYFTIAEIRAATNNFDDVFIIGVGGFGNVYKGFIDRSTPVAIKRLKSGSQQGANEFINEIELLSQLRHIHLVSLVGYCNDDREMILVYEFMQHGTLCEYLYGSNKQPLPWKQRLDILLGAARGLHYLHAEVKHKIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGISTTHVSTMVKGSLGYLDPEYYMLQRLTLKSDVYSFGVVLLEVLCARPPLVRDLDKNTASLICWFKKCYDEGVAIEQIVDPFLMDCITEECLKYYCKLALSCLHDDGTQRPSMSQVVVGLEYVLQMEVSEDGSQQFSQFMSDEESDHHSARSHTYKESTASAMASTQEHSLSNIVNPRPRSYSCQNLKVYI 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00322 623 PANTHER OS07G0166700 PROTEIN 264 559 IPR045272 GO:0004714|GO:0006468
Mepo3g00322 623 FunFam Receptor-like protein kinase FERONIA 356 574 - -
Mepo3g00322 623 FunFam receptor-like protein kinase FERONIA 243 355 - -
Mepo3g00322 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Mepo3g00322 623 ProSiteProfiles Protein kinase domain profile. 280 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00322 623 SMART serkin_6 280 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00322 623 MobiDBLite consensus disorder prediction 567 609 - -
Mepo3g00322 623 CDD TM_EGFR-like 214 240 - -
Mepo3g00322 623 Pfam Protein tyrosine and serine/threonine kinase 286 550 IPR001245 GO:0004672|GO:0006468
Mepo3g00322 623 Gene3D Phosphorylase Kinase; domain 1 240 355 - -
Mepo3g00322 623 Pfam Malectin-like domain 49 183 IPR024788 -
Mepo3g00322 623 Gene3D - 18 185 - -
Mepo3g00322 623 MobiDBLite consensus disorder prediction 587 609 - -
Mepo3g00322 623 CDD STKc_IRAK 286 549 - -
Mepo3g00322 623 SUPERFAMILY Protein kinase-like (PK-like) 254 552 IPR011009 -
Mepo3g00322 623 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
Mepo3g00322 623 Gene3D Transferase(Phosphotransferase) domain 1 356 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00322 Mepo-Chr3 4398640 4400643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00322 29 563 Receptor kinase-like Gene Family AT3G51550 46.481 1.33e-165 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo3g00322 PK_Tyr_Ser-Thr 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00322 - - mtr:25497555 961.059