Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00320 ATGATTTTGGTCTATGAGTTCATGCAGCATGGTACCCTCTGCGAGTATCTTTATGGTTCTAATAACCAGCCCCTACCATGGAAGCAGAGGCTTGAAATTCTTTTTGGTGCAGCTAGAGGGCTGAATTATCTTCATACTGAGGTGAAGAACAAGATAATACATCGTGACGTAAAGAGCACCAACATATTGTTGGATGAGAAATGGATAGCTAAGGTTTCTGATTTTGGGTTATCCAAGGTGGGACCGACAGGTATATCGACTACCCACGTCAGCACAATGGTTAAGGGAAGCTTGGGGTATTTAGATCCTGAGTACTATATGTTCCAAAGGCTTACTCTTAAATCTGATGTGTACTCATTTGGTGTGGTGCTTCTTGAGGTGTTGTGTGCTAGGCCACCTTTGGTTCACGATTTGGATAAGAATACAGCCAGTCTAGTTTGTTGGTTCAAAAGATGCTACGAAGAAGGTGTGGCGATTGAACAAACAGTGGATCCATTCCTAAGAGATTCTATCACGGGTGAGTGTTTGGAATATTATTGCAAGTTGGCGTTAAGTTGTTTACATGATGATGGAATTCAACGACCCTCAATGAGTCAGGTGGTTGGGGGTTTAGAGTTTGCGTTGCAATTGGTGGTGAGTGAGGAAGATAGTCAGTTTGATATGACCCAAAAAGAGAGGACATATATGAGTGATGAATGGAGTGACTTGCATTTCACGAGATCGCACACCTACAAGGAGAGTACGGTCTCAGTGAGGCCAAGTACTCGAGAACAACCTTTCTTTGAAATTGAGAATCAAAGAACACGGTCGTATTCATGCCAAAACTTCAAAACTTATATGTAG 843 0.4223 MILVYEFMQHGTLCEYLYGSNNQPLPWKQRLEILFGAARGLNYLHTEVKNKIIHRDVKSTNILLDEKWIAKVSDFGLSKVGPTGISTTHVSTMVKGSLGYLDPEYYMFQRLTLKSDVYSFGVVLLEVLCARPPLVHDLDKNTASLVCWFKRCYEEGVAIEQTVDPFLRDSITGECLEYYCKLALSCLHDDGIQRPSMSQVVGGLEFALQLVVSEEDSQFDMTQKERTYMSDEWSDLHFTRSHTYKESTVSVRPSTREQPFFEIENQRTRSYSCQNFKTYM 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00320 280 PANTHER OS07G0166700 PROTEIN 1 210 IPR045272 GO:0004714|GO:0006468
Mepo3g00320 280 SUPERFAMILY Protein kinase-like (PK-like) 2 203 IPR011009 -
Mepo3g00320 280 Pfam Protein tyrosine and serine/threonine kinase 2 201 IPR001245 GO:0004672|GO:0006468
Mepo3g00320 280 FunFam Receptor-like protein kinase FERONIA 8 227 - -
Mepo3g00320 280 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00320 280 Gene3D Transferase(Phosphotransferase) domain 1 8 232 - -
Mepo3g00320 280 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00320 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00320 Mepo-Chr3 4387556 4388398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00320 1 217 Receptor kinase-like Gene Family AT3G51550 62.212 1.19e-86 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo3g00320 PK_Tyr_Ser-Thr 3.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00320 - - mtr:25497555 523.472