Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00310 ATGAATAAGAATTCTTCAAAAGAAGATTTTCCATTGAAACAAGAGGTTCATCAAAATTCAAACGATCATGAAAAAGAAAAGGCTAATTCACCATCATCAAGCTCCTTAGCTTCATCACAATGGCCAAGATTGAAAGATCCAAGAATTGTCAGAGTATCAAGAGCTTTTGGTGGAAAGGATAGACATAGCAAAGTATGCACAATAAGAGGATTGAGAGATAGAAGAGTAAGGCTTTCAGTACCAACAGCTATTCAACTTTATGATCTTCAAGATAGGTTAGGGCTTAATCAACCTAGCAAAGTTGTTGATTGGTTGCTCAATGCAGCTAAACAAGATATTGATCAACTTCCACCATTACCTAATTTTCCACCTGTAGGAACAAATTTCAACTTTGGTTTTCCATCTTCTAATGAAATCAACAATCAACAATTCTTCAATTTCAATAGGAACAATATTCATTGGGAAGGTTCAACTTCAAGTCAAAACCCTAAAGAAGTTTCAAGAGAATTGGTTAATGATAAACCAAATTATTTGATGAATAGTGCTCAACAAGAGGAAAATATTAACAACAAGCAAGGAAGCAATATTGAAGTTCCTACTGCAACTGTTTTTCCAAATAATAACAATGTGTTACAAAGACCAAATCACCCTTCATTTCTTGGTTTATTAAATACTATGCCACTTGGTACTAATTACCAATGGGGAGGTACTTCCAATGATGCTGAAAATTCTTCTCAATTGGGAAACAATGGCTTTATTACATCTTTGCCACCAATGTTGTCATTATCAACTGGAAATTCTTCTCAAATGATGTTAGGTACAACACAATCATATTTTTCTTCTAATGTTAATGCAATGGAGATGGATCATCATCAAAGAGAAATCCACAACCATCATTATCATCAAATGTTGAGTTCATCAAGTTCTTCTCAGAATCCAATGACTAATTCTCTCAATAATCCATCCTTCAGTTTGGCCAAATTTCTACAAAACAGCAGAGAAAATTCATCCAATAAAGAACAAGAGTTCACTACAAAGTGA 1041 0.3372 MNKNSSKEDFPLKQEVHQNSNDHEKEKANSPSSSSLASSQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKQDIDQLPPLPNFPPVGTNFNFGFPSSNEINNQQFFNFNRNNIHWEGSTSSQNPKEVSRELVNDKPNYLMNSAQQEENINNKQGSNIEVPTATVFPNNNNVLQRPNHPSFLGLLNTMPLGTNYQWGGTSNDAENSSQLGNNGFITSLPPMLSLSTGNSSQMMLGTTQSYFSSNVNAMEMDHHQREIHNHHYHQMLSSSSSSQNPMTNSLNNPSFSLAKFLQNSRENSSNKEQEFTTK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00310 346 MobiDBLite consensus disorder prediction 1 29 - -
Mepo3g00310 346 Pfam TCP family transcription factor 58 184 IPR017887 -
Mepo3g00310 346 MobiDBLite consensus disorder prediction 1 42 - -
Mepo3g00310 346 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 312 IPR005333 GO:0003700
Mepo3g00310 346 MobiDBLite consensus disorder prediction 301 322 - -
Mepo3g00310 346 ProSiteProfiles TCP domain profile. 58 116 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00310 Mepo-Chr3 4272884 4275133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00310 31 130 TCP Transcription Factor Family AT3G02150 76.000 1.36e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo3g00310 TCP 1.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00310 - - gmx:100816424 293.893