Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00300 ATGGCTTTGAACAACAATATCAAAATTCATGAACACTTAAAAGTTGTTCCTCCATCATCAACCCAAACTACAACAATTCCTTTCACTTTCTTTGACATATTTTGGCTAAAGTTTCATCCTATAGAACGAATTTTCTCCTACTCCCTCCCAAATACACAATCACACCCTTCTTTCTTCTTTCAAAAACTAGTTCCAATTCTCAAATCTTCACTCTCTTTAACCCTCCAACACTTTCTCCCTTTAGCTGGTAAAATTATCTGGCCTTCAGAATCTCAACAACCAATAATCCAATACACCCCAAATGATGGTGTTTCCTTGCTTATTGCCGAGTCTAATGTAGACTTTGATCATGTCATTGAAAATTCACCCCATGAAGCTTCTTTGTCTCGTTCTTTTATTCCACATTTGGAGTCAACAAATTCATCTGCTTCAATTATTTCAATTCAGATAACCCTTTTTGCAAAAAGTGGTTTTTCTATTGGAATAAGCACACACCATGCTGTTCTTGATGGAAAATCTTCAACCATGTTCATGAAAGCTTGGGCTTATCTATGCAACAAAATAATTGAAACCAAAGAAGAATCACCAACTTTGTTACCTGAGTTAGAACCTTTATTCGATAGGGATGTCATCAAAGACCCAAATGAGCTTGGTGTTACATTCACAAACAGCTGGACCGAGATCATATCCAAGATGTTCCCAAACGAAAAAGGAAATGAACGTAGCTTAAATATTTTACACTTTGAACCAAAACTTGAAGACTCTGTTCGTGCCACATTCAATCTCACGCGTGAAGATTTGAACGAGATAAAGCAAATGGTGTTATCAAAATGGGAATTTTATGATACAAATGAATCATATTCAAAGCCACAAACTTTATCATCTTTTGTTCTCACTTGTGCTTATTCACTCGTTTGTTATGCAAAAGCGATTCACCGAGCTGATATGGAGAAAGAAAAGTTTTCTTTTGCTTTCACCATAGATTGCAGAGCAAGGTTAGAACCACCAATACCAAGTAACTTTTTTGGAAACTGTGTTTGGGGGCACTTCATCGATTCACAACCGTTGGATTTCATTAAAGAAGATGGTGTTTTCTTAGTTGCTAAGTGTATTTACGAGAAAATAAAGATGATAAATGAGAACGGTGTCCTTGAAGGGGCTATTAGTGATGGGTTTGATAAGTACAATTCTTTGATAAATGAAGGATTTGGAGTGTTTGGAGTGGCGGGGTCTAATAAATTTGGTGTTTATGAGACTGATTTTGGTTGGGGAAGGCCAAAAAAGGTGGAGATAGTGTCGGTGGATAGAGGTTTAACCATTGGTTTCGCAGAGAGCAAAGATGGGAATGGTGGGGTTGAAGTTGGTCTTGTTCTTAATAAGCATGTAATGGATCTCTTTAGCAAATTGTTTCTTGAAGGACTGTGCTTTAATTGA 1434 0.3682 MALNNNIKIHEHLKVVPPSSTQTTTIPFTFFDIFWLKFHPIERIFSYSLPNTQSHPSFFFQKLVPILKSSLSLTLQHFLPLAGKIIWPSESQQPIIQYTPNDGVSLLIAESNVDFDHVIENSPHEASLSRSFIPHLESTNSSASIISIQITLFAKSGFSIGISTHHAVLDGKSSTMFMKAWAYLCNKIIETKEESPTLLPELEPLFDRDVIKDPNELGVTFTNSWTEIISKMFPNEKGNERSLNILHFEPKLEDSVRATFNLTREDLNEIKQMVLSKWEFYDTNESYSKPQTLSSFVLTCAYSLVCYAKAIHRADMEKEKFSFAFTIDCRARLEPPIPSNFFGNCVWGHFIDSQPLDFIKEDGVFLVAKCIYEKIKMINENGVLEGAISDGFDKYNSLINEGFGVFGVAGSNKFGVYETDFGWGRPKKVEIVSVDRGLTIGFAESKDGNGGVEVGLVLNKHVMDLFSKLFLEGLCFN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00300 477 Gene3D - 7 235 IPR023213 -
Mepo3g00300 477 PANTHER - 7 474 - -
Mepo3g00300 477 Pfam Transferase family 8 468 - -
Mepo3g00300 477 Gene3D - 251 475 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00300 Mepo-Chr3 4111519 4113233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00300 7 472 Monolignol Biosynthesis Gene Families AT5G48930 22.292 2.27e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00300 - - tpra:123889238 696.041