Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00286 ATGGCGTTGCAAACAGCCGCTCCTCCAACTACTCCCAGTCCCGAAATGGTTGGTAATGCATTTGTTGAGCAGTATTACCATATTCTTCACCATTCTCCGGAGTTAGTCTATCGGTTTTACCAGGAGTCTAGTGTGATAAGCCGGCCTGATTCCAATGGTGTGATGACATCAGTTACAACCATGAAAGGCATTAACGAGAAGATTCTTTCGCTAAATTTTAAGGAATTTAAAGCAGAGATTAAGACCGCAGATGCTCAAAAATCGCACAAGGAAGGAGTGACTGTGCTTGTGACCGGATGCTTGACTGGAAAGGATAACTTGAGAAGAAAATTTGCACAGTCATTCTTCCTTGCTCCACAAGACAACGGTTTTTTCGTTCTGAATGATGTTTTTAGGTATGTAGAAGACCCTGAACCTTCAGAACCACATCCAGTTAATGATGATGGGCCTATTGCTGTTACTGTAACCTCAGAACCAGAACCGGTTCACATTGCTGATCCTTCTCCACCGGACCCCGCGAATTCTTATGTGAAAGAACGCCAAATTGTTGCTGAGAATGCTTATGAGCCTTCTAACCATCCTGAAACGCAGATAGTTGCCGAAAATGATGACACCGTAGAACCTGATTTTCAGTCAAATGAGAATGATGATTCTCAGGCAGCTGAAATCACTTCTCTGTCTCAAGAGGATGCTCCAAAGAAGTCTTATGCATCAATTGTTAAAGTCCCAAAAGGAAATTTGGTACCGGCTAAAGTGTATGTGCCAACTAAAACTGTAAAGAATGTGCCAACTAATACTGTAAAGAAGGTGACCAACAGAACTGAAAGCAAAGTAGTTGAACCAGTAGAATCTGCTGCAGTGCCTGATGCAGCACCGGATAATGTTGGCAACCCTGAAAGTAATGATAGTCATGAGGAAGTCGAGGGACACTCCATTTACATTCGAAATTTGCCGTTAAATGTAACGGTTGCTCAGTTGGAAACAGAGTTTCAGAAATTTGGACCGATCAAGCCAGGATGCATCCAAGTCAGAAATAATAAGCAGCAGGGATACTGTTTCGGCTTTGTTGAATACCTATCAGTAAATTCAATGAATAATGCAATTCAGGCTTCACCAATTGCTATTGGGGGGCGTCAAGCTGTAGTAGAGATAAAGAGAACCACTGCTCGAGTTGGCGGTGGCACCGGCGGTATTGGAAGACCTAGGTTTCCTTCCGGAAGAAGTGGATTTCGAAATGATCCATTCAGAGGTCGTGGGAATTTCGGTGGTGGTCGGGGCTTTGGTCGAAACAACGACCATGGAAACCGAGGTGAGTTTCCTATTAGAGGTCGTGGTCCCAGTGGACGTGGAGAAGGTTATCACCAAGGGAGAGGAAGAGGTGGCGGCCGGTCTAGTGTATTTAAACAAAGTCCCGTCGCCACCGAATGA 1428 0.4454 MALQTAAPPTTPSPEMVGNAFVEQYYHILHHSPELVYRFYQESSVISRPDSNGVMTSVTTMKGINEKILSLNFKEFKAEIKTADAQKSHKEGVTVLVTGCLTGKDNLRRKFAQSFFLAPQDNGFFVLNDVFRYVEDPEPSEPHPVNDDGPIAVTVTSEPEPVHIADPSPPDPANSYVKERQIVAENAYEPSNHPETQIVAENDDTVEPDFQSNENDDSQAAEITSLSQEDAPKKSYASIVKVPKGNLVPAKVYVPTKTVKNVPTNTVKKVTNRTESKVVEPVESAAVPDAAPDNVGNPESNDSHEEVEGHSIYIRNLPLNVTVAQLETEFQKFGPIKPGCIQVRNNKQQGYCFGFVEYLSVNSMNNAIQASPIAIGGRQAVVEIKRTTARVGGGTGGIGRPRFPSGRSGFRNDPFRGRGNFGGGRGFGRNNDHGNRGEFPIRGRGPSGRGEGYHQGRGRGGGRSSVFKQSPVATE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00286 475 Gene3D - 8 136 - -
Mepo3g00286 475 Gene3D - 274 402 IPR012677 -
Mepo3g00286 475 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 310 387 IPR000504 GO:0003723
Mepo3g00286 475 MobiDBLite consensus disorder prediction 212 232 - -
Mepo3g00286 475 SUPERFAMILY NTF2-like 13 134 IPR032710 -
Mepo3g00286 475 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 312 370 IPR000504 GO:0003723
Mepo3g00286 475 FunFam Ras GTPase-activating protein-binding protein 1 298 430 - -
Mepo3g00286 475 Pfam Nuclear transport factor 2 (NTF2) domain 17 133 IPR002075 -
Mepo3g00286 475 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 13 456 IPR039539 -
Mepo3g00286 475 ProSiteProfiles Nuclear transport factor 2 domain profile. 17 133 IPR018222 -
Mepo3g00286 475 CDD RRM_SF 312 370 - -
Mepo3g00286 475 MobiDBLite consensus disorder prediction 391 475 - -
Mepo3g00286 475 SUPERFAMILY RNA-binding domain, RBD 299 418 IPR035979 GO:0003676
Mepo3g00286 475 SMART rrm1_1 311 383 IPR000504 GO:0003723
Mepo3g00286 475 CDD NTF2 13 135 IPR018222 -
Mepo3g00286 475 MobiDBLite consensus disorder prediction 274 307 - -
Mepo3g00286 475 FunFam Nuclear transport factor 2 family protein 8 138 - -
Mepo3g00286 475 MobiDBLite consensus disorder prediction 206 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00286 Mepo-Chr3 3895193 3902885 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00286 K24983 - gmx:100805494 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00286 3 3895193 3902885 Mepo3g00286 3 3895193 3902885 ECH