Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00283 ATGGATCAAAGAAAAAATATCTTTGTTCATGTAGTTATTTTTTTGGTCGTGGTTCTTCTTAGAGGAAGTAATGTTGAAGCAAAAGGAGAAGAAGAGAAAGATAGGATTTTCAAGCTTCCTGGTCAACCTAAAGTTTTGTTTAAGCAATTTTCTGGCTATGTTACTGTTAATCATGTTGCTGGTAGAGCTCTCTTTTATTGGTTAACTGAAGCTGAACAAAATCCTCTCAACAAACCACTTGTCATTTGGCTTAATGGAGGTCCAGGTTGTTCATCAGTAGCATATGGAGCATCTGAAGAGATTGGCCCATTTAGATTAAACAAAACAGCTTCTGGGCTTTACATTAACAAGTTTGCATGGAACACAGTGGCCAACCTTTTATTCTTGGAAGCTCCGGCCGGGGTCGGCTTCTCCTACAGCAACCGGTCTTCCGACCTCCTTGACACCGGCGACCGCCGCACTGCCAAGGACTCTCTAGAATTTGTAATCCGGTGGCTAGAAAGATTCCCACGTTACAAGAATAGGGAACTTTATATAACAGGAGAGAGTTATGCAGGACATTATGTCCCTCAATTAGCAAAGGAAATTATGACCTATAACATAAAAGCCAAGCAACGCATCAATCTCAAGGGAATAATGGTTGGGAATGCAGTGACAGACAACTATTATGATAACTTGGGCACAGTGACGTACTGGTGGAGCCATGCTATGATATCTGATCAAACATACAAACAACTCATTAGTACTTGTGATTTTCACCACCAGAAAGAATCCAATGAATGTGAATCTTTATATAGCTATGCTATGGATCAAGAATTTGGTAATATTGATCAGTATAATATCTATGCTCCACCATGTAACAATTCCGACGGCAGCTCGTCTGGTACCCGCCACACTCTTCGGTTGCCCCACCTTCCTCATGTGGCTTTTAGGCAAATGGCTGGTTATGATCCATGTACAGAAAAATATGCAGAAGTTTACTACAATAGGCCAGATGTTCAAAAAGCACTTCATGCTAACACAACAGGAATTCCTTATAAATGGACTGCTTGCAGTGAAGTTTTGAATAGAAACTGGAATGATACAGATGTATCTGTTCTTCCACTATATAGAGAATTGATAGCTCATGGAGTAAGAGTTTGGGTTTTCAGTGGAGATGTAGACTCAGTGGTTCCAGTTACAGCAACAAGATATGCCCTTGCACAGCTTAAGTTGGCTACTAAAATACCATGGTATCCTTGGTATGTCAAAAAGCAGGTTGGAGGTTGGACAGAGGTATATGAAGGGCTAACATTTGCCACAGTGAGAGGAGCAGGACATGAAGTCCCACTATTCAAGCCTAGGGCAGCCCTTCAATTATTCAAATCATTCCTTGCAGGAAAACCTCTTCCAAAAGTCCTAAAATAG 1407 0.4094 MDQRKNIFVHVVIFLVVVLLRGSNVEAKGEEEKDRIFKLPGQPKVLFKQFSGYVTVNHVAGRALFYWLTEAEQNPLNKPLVIWLNGGPGCSSVAYGASEEIGPFRLNKTASGLYINKFAWNTVANLLFLEAPAGVGFSYSNRSSDLLDTGDRRTAKDSLEFVIRWLERFPRYKNRELYITGESYAGHYVPQLAKEIMTYNIKAKQRINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYKQLISTCDFHHQKESNECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSSGTRHTLRLPHLPHVAFRQMAGYDPCTEKYAEVYYNRPDVQKALHANTTGIPYKWTACSEVLNRNWNDTDVSVLPLYRELIAHGVRVWVFSGDVDSVVPVTATRYALAQLKLATKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLAGKPLPKVLK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00283 468 FunFam Carboxypeptidase 366 460 - -
Mepo3g00283 468 Gene3D - 366 460 - -
Mepo3g00283 468 Gene3D alpha/beta hydrolase 30 288 IPR029058 -
Mepo3g00283 468 FunFam Carboxypeptidase 30 288 - -
Mepo3g00283 468 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Mepo3g00283 468 Pfam Serine carboxypeptidase 43 459 IPR001563 GO:0004185|GO:0006508
Mepo3g00283 468 Gene3D - 319 356 - -
Mepo3g00283 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Mepo3g00283 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Mepo3g00283 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Mepo3g00283 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Mepo3g00283 468 FunFam Carboxypeptidase 315 463 - -
Mepo3g00283 468 SUPERFAMILY alpha/beta-Hydrolases 32 464 IPR029058 -
Mepo3g00283 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 447 IPR001563 GO:0004185|GO:0006508
Mepo3g00283 468 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00283 Mepo-Chr3 3832509 3840911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00283 324 463 Calmodulin-binding Proteins AT2G22960 30.496 7.57e-16 73.9