LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g00242	ATGTCCAACTCCCTAGTATTTTCATGTCCAACTCCCTACAACAATAGTAAAATAACCTTACTGTCTTTTACTTTGTTTCTCCTTCTTCTATTGTGGTTTCCTCTCACGGTTAACAGCTCATATGATATTTTAGCCGTGAATTGTGGCCACACCATAGATACTATCTTCGAAAACCGAACCTGGGTTGGGGACATTGATGACACCAAATTGTTCTATATCATTGAACCACATACTGAATTCTCATCTGTCAAAACCAAAGCTATTCCTAACTTTGATTTGGTTAAACGAATCCCTTTTTCCTCCGCACGACTTTCTTTTTCCAATTTCACAGTCTCATTTCCTAGTAGCGTTATTGACATTGACGGCGTTGGCAATACCGTTTTTCTTCGCCTCCATTTTTACCCGACATCATATCAAAACTTTGAAACCTCCAACGCCCTTTTCACAGTCAAATTAGGAAACAATATAACCCTTCTTAAAGACTTTAACCCTTTACTTTGGCTTCAAAATGATAACAAGACAATCACCAAAGAATATTGCATCACAAAGGAACCTGGTGAGAACCTAAACATAACTTTCATTCCCAAATTCACAAATCAATCAAACACTTATGCTTTCGTCAATGGAATTGAGATTGTTTCAATGCCTTCTTTTCTCTATTACACTGATCTCGATGACAAGAACTATCATTTAAATTTTCTAGGCTTAGACAACACAGAATACCAGATTCTTAACGACAAAGCTTTGGAAACTGTTTATAGAGTCAACGTTGGTGAAAATCAAGTTCCACCAAACCAAGATACTGGTATGTTTCGTAATTGGGACAATGATTTTCCTCTTTACTTGGAGAAACAATATCCGCAAAGTATATCAAGTGATTATGGAGAGCATCTCAACTATTCAAGCAATACCATTCAAAATTACACTGCACCAGAAGCTGTATACTTAACTGCAAGAAGTTATGGAATGTATGCCAAAGAGAATTATAATGTGACATGGAATTTTGAAGTTGATTCTTCTTTCACTTATATGGTAAGGTTACATTTTTGTGAGTTTGATTGGCATATCAACAATAAAGGTGATAGAGTCTTTCAGATATTCATAGATAACACTTTGGTTGAAGAAAAGGCGGATGTGATAAGGTGGAGTGGTGCTCTTATGGCTCCTGTTCATAAGGATTATGCTGTGCCTATGTACTCTCAAGAAGGATTAAGCTCTAAAATTGAAAGAGTTAATCTTTCGATCAAGCTTCAACGAGTACCAGAAACTATTTTCACAAAATACAGTGATGTCACTCTTAATGGAATTGAGATTTTAAAAGTAAGTGACAAAAATAAAAATCTTGCAGGACCAATATCAAAATCCATTGATCTATCTCCCCCGTATCAAGCATTTCCTACCCAATCGTCAAAAGAAATTAAGATCACCACAACTATTGTTGTTGTAATTGCAGTTTCAGGCCTGATGCTAGCAATTGTGGTGGGTATCATAGTTTTTTGGCTAAGGAGAAGGTTTCACAATGCCACGGCAGATAACTTGTCAAAGACAAAGAACATAGAGTTACCATCCTTGCCGCCCCATTTGTGCCGCTACTTTACAATTGCAGAGATCAGAGCAGCCACAAACAACTTCGATGATGTTTTCATCATCGGAGTTGGAGGGTTTGGCAACGTGTACAAAGGTTTTATTGATGGATCCACTCCTGTTGCGATAAAACGCCTTAAATCAGGCTCTCAACAAGGTGCCAATGAGTTCATGAACGAGATTGAGTTGCTCTCCCAGCTTCGCCACATTCACTTGGTCTCCCTCGTGGGATATTGCAACGACGACACAGAGATGATTTTGATTTATGAGTTCATGCAGCACGGTACTCTTTGTGAGTATCTCTATGGCTCCAATAACCAACCCCTACCATGGAAGCAGAGGCTTGATATTCTATTGGGTGCAGCGAGAGGGCTGCATTATCTTCATGCTGAGGTAAAACACAAAATAATACACCGTGACGTGAAGAGTACCAATATATTGTTGGATGACAAATGGGTGGCTAAGGTTTCCGATTTTGGGTTATCTAAGGTAGGACCCACGGGGATATCGACTACCCATGTTAGCACGATGGTGAAGGGGAGCCTTGGGTATTTAGATCCTGAGTACTACATGCTCCAAAGGCTTACTCTGAAATCTGATGTGTACTCATTTGGTGTGGTGCTTCTTGAGGTGTTGTGTGCTAGGCCACCTTTGGTTCGCGATTTAGACAAGAAGACAGCTAGTCTAGTTTGTTGGTTTCAAAGATGTTTCGATGAAGGTGTGGCAATTAAACAAATAGTGGACCCATTCCTAAGGGATTCTATCAGGGATGAGTGTTTGGAACATTATTGCAAGTTGGCATTGAGTTGTTTACATGATGATGGGACTCAACGGCCCTCGATGAGTCAAGTGGTTGGGGATTTAGAGTTTGCGTTGCGGTTGGTGGAGACTGATGAAGGTAGCCAATTTGTTAAGGCCCAAAAAGACGGAACACATATGAAAGGACTACAATTCTCGCAGTTTATGAGTGATGAAGAAATTGACTTGCCTTTCACAAGATCCCACACCTACAAGGATAGCACAGCCTCAGCGAGGCCAAATACTCAGGAACATCCTTTCTCTGAGATTGGGAATCCAAGACCACGGTCCTATTCATGTCAAAACCTCAAAGTTTATATTTAG	2706	0.398	MSNSLVFSCPTPYNNSKITLLSFTLFLLLLLWFPLTVNSSYDILAVNCGHTIDTIFENRTWVGDIDDTKLFYIIEPHTEFSSVKTKAIPNFDLVKRIPFSSARLSFSNFTVSFPSSVIDIDGVGNTVFLRLHFYPTSYQNFETSNALFTVKLGNNITLLKDFNPLLWLQNDNKTITKEYCITKEPGENLNITFIPKFTNQSNTYAFVNGIEIVSMPSFLYYTDLDDKNYHLNFLGLDNTEYQILNDKALETVYRVNVGENQVPPNQDTGMFRNWDNDFPLYLEKQYPQSISSDYGEHLNYSSNTIQNYTAPEAVYLTARSYGMYAKENYNVTWNFEVDSSFTYMVRLHFCEFDWHINNKGDRVFQIFIDNTLVEEKADVIRWSGALMAPVHKDYAVPMYSQEGLSSKIERVNLSIKLQRVPETIFTKYSDVTLNGIEILKVSDKNKNLAGPISKSIDLSPPYQAFPTQSSKEIKITTTIVVVIAVSGLMLAIVVGIIVFWLRRRFHNATADNLSKTKNIELPSLPPHLCRYFTIAEIRAATNNFDDVFIIGVGGFGNVYKGFIDGSTPVAIKRLKSGSQQGANEFMNEIELLSQLRHIHLVSLVGYCNDDTEMILIYEFMQHGTLCEYLYGSNNQPLPWKQRLDILLGAARGLHYLHAEVKHKIIHRDVKSTNILLDDKWVAKVSDFGLSKVGPTGISTTHVSTMVKGSLGYLDPEYYMLQRLTLKSDVYSFGVVLLEVLCARPPLVRDLDKKTASLVCWFQRCFDEGVAIKQIVDPFLRDSIRDECLEHYCKLALSCLHDDGTQRPSMSQVVGDLEFALRLVETDEGSQFVKAQKDGTHMKGLQFSQFMSDEEIDLPFTRSHTYKDSTASARPNTQEHPFSEIGNPRPRSYSCQNLKVYI	901

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g00242	901	ProSitePatterns	Protein kinases ATP-binding region signature.	550	572	IPR017441	GO:0005524
	Mepo3g00242	901	Gene3D	-	247	442	-	-
	Mepo3g00242	901	Gene3D	-	42	216	-	-
	Mepo3g00242	901	Pfam	Malectin-like domain	124	441	IPR024788	-
	Mepo3g00242	901	ProSiteProfiles	Protein kinase domain profile.	544	819	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00242	901	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	664	676	IPR008271	GO:0004672\|GO:0006468
	Mepo3g00242	901	SUPERFAMILY	Protein kinase-like (PK-like)	518	819	IPR011009	-
	Mepo3g00242	901	CDD	STKc_IRAK	550	817	-	-
	Mepo3g00242	901	CDD	TM_EGFR-like	477	507	-	-
	Mepo3g00242	901	PANTHER	OS03G0124300 PROTEIN-RELATED	22	504	IPR046957	GO:0004672
	Mepo3g00242	901	Gene3D	Phosphorylase Kinase; domain 1	505	619	-	-
	Mepo3g00242	901	FunFam	receptor-like protein kinase FERONIA	506	619	-	-
	Mepo3g00242	901	FunFam	FERONIA receptor-like kinase	43	216	-	-
	Mepo3g00242	901	Gene3D	Transferase(Phosphotransferase) domain 1	620	837	-	-
	Mepo3g00242	901	MobiDBLite	consensus disorder prediction	866	889	-	-
	Mepo3g00242	901	SMART	serkin_6	544	819	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00242	901	FunFam	Receptor-like protein kinase FERONIA	620	838	-	-
	Mepo3g00242	901	Pfam	Protein tyrosine and serine/threonine kinase	550	816	IPR001245	GO:0004672\|GO:0006468
	Mepo3g00242	901	FunFam	FERONIA receptor-like kinase	247	442	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g00242	Mepo-Chr3	3360113	3362893	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g00242	46	827	Receptor kinase-like Gene Family	AT3G51550	43.819	0.0	597

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mepo3g00242		Malectin_like	1.7e-28	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g00242	-		-	mtr:25497555	1337.01