Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00223 ATGCCCACCTTCTCCTCTCTCCCTAGGTGGATTGGTGGTAAATTCTTGGGAAGGAATCCTAGCAACACAATCAACAACGTTGGTGACAGCAGTGACGACCCTGGAGTTGCCGTCTCAGCAGACGACAACCCAGTAATCAGTATGGTGGAGTGTTACGCATGCACACAAGTAGGTGTGCCAGTGTTCCACTCCACCAGCTGTGCAGACAGTTGTCACCAACCTGAATGGGAAGCGTCCGCCGGTTCCTATCTAGTTCCAATCCAAAACCGTCCCGGAAAATTCGCAAGAGCAGTATCAAAGCCAAATTGGGGAGTTTTAGGCAAAGTATTAGATCCTAGAAGCAAGCGCGTGCAATTATCCAACCGCGCGTTGTTGTTGGCGCGTGGGGTTGCTCTAGCTATTGATCCGTTGTTTTTCTATGCGCTGTCTATCGGAAGAGAAGGGTCAACGTGTTTGTATATGGACGGTGGTTTAGCGGCGGTTGTTACGGTGGCGCGTACGGTGGTTGATGCGGTGCATTTGTTTCATGTTTGGTTGCAGTTTAGATTAGCTTATGTGTCGAGAGAATCACTTGTTGTTGGATGTGGGAAACTCGTGTGGGACGCACGTGCCATTGCTTCTCATTATATGAGATCTTTCAAAGGTTTTTGGTTTGATGTTTTTGTTATTCTTCCTGTTCCTCAGGTTGTGTTTTGGCTAGTAGTACCAAAACTGATAAGAGAAGAGAGAATTAAAATCATTATGACAACATTGCTATTGATTTTTTTGTTCCAATTTCTCCCTAAGGTTTACCATAGCATATCTATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGATTTGGACTCAATCTCATTGCTTATTTCATTGCTTCGCACGTTGCTGGAGGGTGTTGGTATGTTCTTGCGATTCAACGCGTTGCATCATGCCTTCAACAACAGTGTGAAAGAACTATTGGATGCAATCTTTCTCTGGCATGTTCAGAGGAGGTATGCTATAAGTCTTTGTTACCAGAAACAATTGGAAATCCGTGTGGTGGAAACTCAACGATGATGTCAAAGCCTGTGTGCTTAGATGTTGACGGACCTTACAAATATGGGATTTACCAATGGGCACTTCCAGTCATATCCAGCAATTCCTTGGCTGTCAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTTGAAGTGATTTTCAGCATATGCATTGTACTCAGTGGACTATTACTTTTCACTTTGTTGATCGGAAACATCCAGGTCTTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTAAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCGTCCCGATTAAGACAAAGAGTTCGGCATTTTGAACGTCAGAGATGGGCGGCCATGGGAGGAGAAGATGAAATGGAACTGATCAAAGACTTACCTGAGGGTTTGAGGAGAGACATCAAGCGCCATCTTTGCTTGGACCTCATTAAAAAGGTACCATTGTTTCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAGCCTCTAGTCTTCTCTAGAGATGAAAAGATAATTAGAGAAGGAGATCCTGTACCAAGGATGGTGTTCATTGTTCGCGGACGCATAAAGAGAAACCAAAGTCTAAGCAAAGGAATTGTAGCAACTAGTGTCCTCGAACCAGGAGGTTTCTTAGGCGATGAACTACTTTCTTGGTGCCTAAGACGTCCTTTTATTGACCGGCTTCCAGCCTCCTCAGCCACATTTGTGTGTCTTGAATCAACTGAAGCATTCGGTCTTGATGCTCAAAACTTGAGATACATAACCGATCATTTCCGGTACAAATTCGCAAATGAGAGGCTAAAGAGAACAGCAAGATACTACTCATCGAATTGGAGAACATGGGCTGCAGTTAATATTCAACTTGCTTATAGACGATACAGGCAGAGGACTAGAGGTCCAGTGACTCCTGTAAGGGATAATGGAAGCACTGAACGTAGGCTCATGCAGTATGCTGCAATGTTCATGTCAATTAGGCCACATGATCATCTTGAATGA 2133 0.4426 MPTFSSLPRWIGGKFLGRNPSNTINNVGDSSDDPGVAVSADDNPVISMVECYACTQVGVPVFHSTSCADSCHQPEWEASAGSYLVPIQNRPGKFARAVSKPNWGVLGKVLDPRSKRVQLSNRALLLARGVALAIDPLFFYALSIGREGSTCLYMDGGLAAVVTVARTVVDAVHLFHVWLQFRLAYVSRESLVVGCGKLVWDARAIASHYMRSFKGFWFDVFVILPVPQVVFWLVVPKLIREERIKIIMTTLLLIFLFQFLPKVYHSISMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQQCERTIGCNLSLACSEEVCYKSLLPETIGNPCGGNSTMMSKPVCLDVDGPYKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRHLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSRDEKIIREGDPVPRMVFIVRGRIKRNQSLSKGIVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESTEAFGLDAQNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAYRRYRQRTRGPVTPVRDNGSTERRLMQYAAMFMSIRPHDHLE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00223 710 Gene3D Jelly Rolls 521 639 IPR014710 -
Mepo3g00223 710 Gene3D Helix hairpin bin 449 514 - -
Mepo3g00223 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 107 677 - -
Mepo3g00223 710 SMART cnmp_10 523 649 IPR000595 -
Mepo3g00223 710 CDD CAP_ED 523 633 IPR000595 -
Mepo3g00223 710 SUPERFAMILY cAMP-binding domain-like 450 637 IPR018490 -
Mepo3g00223 710 ProSiteProfiles cAMP/cGMP binding motif profile. 523 633 IPR000595 -
Mepo3g00223 710 Pfam Ion transport protein 134 441 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo3g00223 710 SUPERFAMILY Voltage-gated potassium channels 112 444 - -
Mepo3g00223 710 Gene3D - 148 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00223 Mepo-Chr3 3174005 3180726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00223 42 710 Ion Channels AT5G15410 78.446 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00223 K05391 - gmx:100798823 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00223 3 3174005 3180726 Mepo3g00223 3 3174005 3180726 ECH