Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00222 ATGGGGTCGAAACTTACAAAGCAGGGTTCACCACCCAAAATTAGTAGTCCAACAAGTTTGCAATTACATGAAAGAATGATCCATTACCTTACCAAGAATTTTATTCGTAACTTGGTGTCCAAGCAAAGGAGAAGAATTCTTATTGCTGGTTATGATCTTGATATGTCATATATCACAGATAGAGTATTAGCAATGTCATTTCCGGCTGAACGTATGAGAGCAATGTATAGAAATCCTCTCTGGCAGGTCAAATCTGTGTTGGATATGAGACATCTTGAACATTATAAGGTCTATAATCTGTGTATAGAAGAACATTATGATCCAGCACAGTTTTATGGTCGTGTGGAAGAATACCCTTTTGATGACAATCATGTTCCATCTCTTGAAATGATTAAAGATTTCTGTGAAAGTGTGAATTCCTGGCTGACACGTGACCCAAAAAACATTGTAGTTATTCATTGCATGGCAGGTAAAGGTAGAACTGGTTTGATGGTGAGTTCATACCTAACTTATTGCGGCATGTCAGCAGATGAAGCTCTTCAATTATATGCCGATAGAAGGACTACCAATAATGAAGGAGTATCAATACCAAGCCAACGTCGCTATGTAGGGTACTGGGAAAGTTTACTTTCTGTACCTAGAGGTGCTGGATATGGACCTCCAAAAGTGACTTTGCCTCAACCGTGTAGCAGAGAATTGCGGCGAGTCCGGTTGTATGACACTGTCAACATTGACACAGTATTCTTTGTTATATCAGAACTGCAGGAGATTCCTAATGAGGTCTACCATCCATCAGTGGAGGTTTGTCGGAGCTGCTGTAGAGGAGTTAAGAAAGGTTATCAGAGAACAAACAGTCCTCGGTATTATATTTCTATTCCTCAAGGTGATGAAGATGGAAAACAATCAGAAATAGAAGAACCTCGTGTTGTAGTTCAAATGGATACAGAGTCTCCTGCAATATACCAGAAATCTTGTTTGGACCATTATTTTGATAAACCTATAAAAGTAACCGGAGATGTACGTGTGATATTCTACGAGAAAATGATTGGAGGCCGTCTTTTCTACTGCTGCTTTAATACAGCTTTTATTAGGAACAGCTTACTACAGCTCACAGTAAATGAATTGGACAAAGTTGGGAAGAAAGGAAGATCAATATGTGGCCCTACTTTCTGCCTAGAATTATTGTTTGGTCCTGCTAATACAGGGTATTCATCATCAAGTATATCTATTGGTGAAAACTCCAGTGATCATTCATTATAA 1260 0.3881 MGSKLTKQGSPPKISSPTSLQLHERMIHYLTKNFIRNLVSKQRRRILIAGYDLDMSYITDRVLAMSFPAERMRAMYRNPLWQVKSVLDMRHLEHYKVYNLCIEEHYDPAQFYGRVEEYPFDDNHVPSLEMIKDFCESVNSWLTRDPKNIVVIHCMAGKGRTGLMVSSYLTYCGMSADEALQLYADRRTTNNEGVSIPSQRRYVGYWESLLSVPRGAGYGPPKVTLPQPCSRELRRVRLYDTVNIDTVFFVISELQEIPNEVYHPSVEVCRSCCRGVKKGYQRTNSPRYYISIPQGDEDGKQSEIEEPRVVVQMDTESPAIYQKSCLDHYFDKPIKVTGDVRVIFYEKMIGGRLFYCCFNTAFIRNSLLQLTVNELDKVGKKGRSICGPTFCLELLFGPANTGYSSSSISIGENSSDHSL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00222 419 Gene3D - 275 401 - -
Mepo3g00222 419 ProSiteProfiles C2 tensin-type domain profile. 244 399 IPR014020 -
Mepo3g00222 419 Pfam Tyrosine phosphatase family 145 184 IPR026893 GO:0004721
Mepo3g00222 419 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 31 213 - -
Mepo3g00222 419 CDD PTP_PTEN 54 209 IPR045101 GO:0016791
Mepo3g00222 419 Gene3D Protein tyrosine phosphatase superfamily 30 212 IPR029021 -
Mepo3g00222 419 ProSitePatterns Tyrosine specific protein phosphatases active site. 152 162 IPR016130 GO:0016311|GO:0016791
Mepo3g00222 419 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 306 398 IPR035892 -
Mepo3g00222 419 SMART PTEN_C2_2 226 398 IPR014020 -
Mepo3g00222 419 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 30 405 - -
Mepo3g00222 419 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 132 187 IPR000387 GO:0016311|GO:0016791
Mepo3g00222 419 ProSiteProfiles Phosphatase tensin-type domain profile. 44 213 IPR029023 -
Mepo3g00222 419 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 50 210 IPR029021 -
Mepo3g00222 419 Pfam C2 domain of PTEN tumour-suppressor protein 320 396 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00222 Mepo-Chr3 3169431 3172121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00222 1 403 Protein tyrosine phosphatase (PTP) family AT5G39400 67.407 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00222 K01110 - gmx:100809938 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00222 3 3169431 3172121 Mepo3g00222 3 3169431 3172121 ECH