Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00220 ATGGGTTCCTATTCCAATGAGAAAGAAAACCATGCATTGGAAACTGTCACCCCACAAATAGATGATAGTGATACCCTCTTAGCCATGATTATAGGTGCCAATATGGTGTTTCCTGCAGTTTTTAAAGCTGCAATTGAACTCAACTTGTTTGATATCATTGCTAAGGAAATATCACATGAAAACAGTGTTGGATTTGTGTCAGCTTTCGAAATTGCTTCGAAGTTACCAATAACTCAATACTCCGACTTACCAAATAGGCTCGACCGTATGCTGCGCTTGCTTGCTAGTCACGGTCTCCTGTCCGTTTCCACTCGAACCAACGATGATGGTAGCATGGTGAGAGTTTATGGTATCACACCTTCTGGTAAATACTTTGTCCACCATGAAAACGAGGATAATCGCATGGACTCATTCACATCATACTTGAATCACCCAGCTTTCTTAGGGGTGTGGTCGAATTTGAAGGAAGCAATTATAGAGCCAGAGATAAGCATATTCGAGAAAGTTCATGGAATACCTATCTATGAATACTTTGAGAAAGATCCACAAATAAACAACTTATTTAACAACTCAATGACCGATACATGTACCGTTCACATGAAAAGAATCCTTGAAATATACAAAGGATATAAGGGAATATCAACACTAGTTGATGTAGGAGGTGGAAATGGACAAAGTCTCAAAATGATTATATCCAAATATCCATCAATAAAGGCAATCAATTTTGATCTCCCACAAGTGATTGAACATGCACCACCCTCTCCAGGGATCGAACATGTTGGAGGAAATATGTTTGAATGTGTTCCACAAGGAGATGCTATAATGCTTAAGCTTGTGTGCCATAATTGGTCGGATGAAAAATGCTTAGAAATTCTAAGCAGTTGTCGCAAAGCTTTGCCTTCAAATGGTAAGGTCATTATTGTAGATTTCTTATCGCCAGAAGATCTAGAATCAACAAATGCATCTAAGATGATTTCAATTGTCGATAACATGATGTTTATCACAGCTGGTGGTAAGGAAAGAACTTCAAAAGAATTTGAGATTTTGGGTAAACAATCTGGTTTTTCTAAAGTCAAGGTTGTTTGTTGTGCTTTCTCCGTCCTCGGAGTGATGGAACTCTATAAATAA 1128 0.3821 MGSYSNEKENHALETVTPQIDDSDTLLAMIIGANMVFPAVFKAAIELNLFDIIAKEISHENSVGFVSAFEIASKLPITQYSDLPNRLDRMLRLLASHGLLSVSTRTNDDGSMVRVYGITPSGKYFVHHENEDNRMDSFTSYLNHPAFLGVWSNLKEAIIEPEISIFEKVHGIPIYEYFEKDPQINNLFNNSMTDTCTVHMKRILEIYKGYKGISTLVDVGGGNGQSLKMIISKYPSIKAINFDLPQVIEHAPPSPGIEHVGGNMFECVPQGDAIMLKLVCHNWSDEKCLEILSSCRKALPSNGKVIIVDFLSPEDLESTNASKMISIVDNMMFITAGGKERTSKEFEILGKQSGFSKVKVVCCAFSVLGVMELYK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00220 375 Pfam Dimerisation domain 40 95 IPR012967 GO:0046983
Mepo3g00220 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 372 IPR029063 -
Mepo3g00220 375 SUPERFAMILY "Winged helix" DNA-binding domain 24 129 IPR036390 -
Mepo3g00220 375 Gene3D - 4 125 IPR036388 -
Mepo3g00220 375 PANTHER O-METHYLTRANSFERASE 29 355 IPR016461 GO:0008168
Mepo3g00220 375 Pfam O-methyltransferase domain 151 356 IPR001077 GO:0008171
Mepo3g00220 375 FunFam Caffeic acid O-methyltransferase 129 375 - -
Mepo3g00220 375 FunFam Caffeic acid 3-O-methyltransferase 5 125 - -
Mepo3g00220 375 Gene3D Vaccinia Virus protein VP39 128 375 IPR029063 -
Mepo3g00220 375 PIRSF O-mtase 6 375 IPR016461 GO:0008168
Mepo3g00220 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 375 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00220 Mepo-Chr3 3124875 3128176 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00220 21 375 Monolignol Biosynthesis Gene Families AT5G54160 46.779 8.11e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00220 - - gmx:100798295 498.049