Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00215 ATGTCCTATACCAATGATACACTCTCAGCTATGGTACTTGGTGCCAATTTGGTGTTTCCTGCAGTTCTTAACGCTGCAATTGAACTCAATTTATTTGATATCATTGCTAAGGAAAGTAATGGTGGATTCATGTCATCCTTTGAAATTGCATCAAAGCTACCAACTCAACACTTTGACTTGCCAAATAGGCTTGATCGTATGTTGCGCTTGCTTGCAAGCTACTCTCTTCTGTCTATTTCCACTAAGACCAATGATGATGGTAGCATGGTGAGAATTTATGGTATCACACCATCTGGTAAATATTTTATTAGTAATGAAAATGATGGTGGCTATTTGGGGTCAATGACTTCATATTTGTGTCACCCTGCTTTCTTAGGGGTGTGGTTGAATTTCAAGGATGCAGTTATGGATCCACAGATTGACCTATTCAAGAAAGTTCATGGAATATCTATCTTTGAGTACTTTAAGAAAGATCCACATATAAACTACATATTTAACAAATCAATGACTGATACATGTACACTCCACATGAAAACAATCCTTGAAATATACAAAGGATATGAGGGAATATCAACCCTAGTTGATGTAGGAGGTGGAAATGGACAAAGTCTCAAAGCCATTATATCCAAATATCCATCAATAAAGGCAATCAATTTTGATCTCCCACAAGTGATTGAACATGCACCATCCTCTCCAGGGATCGAACATGTTGGAGGAAATATGTTTGAATGTGTTCCACGAGGAGATGCTATAATGCTTAAGCTTGTGTGCCATAATTGGCCAAATGAAAAATGCTTAGAAATTTTAAGCAGTTGTCACAAAGCTTTGCCTCCAAATGGTAAGGTCATTATTGTGGAGTTCTTATCGCCAGAAGGTCTAGGATCAGTAAATGCATCTAAGATGGTTTCAATTGTTGACAACATCATGTTTATCACAGCTGGTGGTAAGGAAAGAACTCCAAAAGAATATGAGAGTTTAGGTAAACAATGTGGATTTTCTAAACTTCAAGTTGTTTGTCGTGCTTTCTCCATCCTCGGAGTGATGGAACTCTACAAGTAA 1059 0.3749 MSYTNDTLSAMVLGANLVFPAVLNAAIELNLFDIIAKESNGGFMSSFEIASKLPTQHFDLPNRLDRMLRLLASYSLLSISTKTNDDGSMVRIYGITPSGKYFISNENDGGYLGSMTSYLCHPAFLGVWLNFKDAVMDPQIDLFKKVHGISIFEYFKKDPHINYIFNKSMTDTCTLHMKTILEIYKGYEGISTLVDVGGGNGQSLKAIISKYPSIKAINFDLPQVIEHAPSSPGIEHVGGNMFECVPRGDAIMLKLVCHNWPNEKCLEILSSCHKALPPNGKVIIVEFLSPEGLGSVNASKMVSIVDNIMFITAGGKERTPKEYESLGKQCGFSKLQVVCRAFSILGVMELYK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00215 352 FunFam Caffeic acid O-methyltransferase 106 352 - -
Mepo3g00215 352 Pfam Dimerisation domain 22 72 IPR012967 GO:0046983
Mepo3g00215 352 PIRSF O-mtase 1 352 IPR016461 GO:0008168
Mepo3g00215 352 Gene3D Vaccinia Virus protein VP39 105 352 IPR029063 -
Mepo3g00215 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 11 352 IPR016461 GO:0008168
Mepo3g00215 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 349 IPR029063 -
Mepo3g00215 352 PANTHER O-METHYLTRANSFERASE 11 332 IPR016461 GO:0008168
Mepo3g00215 352 Pfam O-methyltransferase domain 128 333 IPR001077 GO:0008171
Mepo3g00215 352 SUPERFAMILY "Winged helix" DNA-binding domain 5 106 IPR036390 -
Mepo3g00215 352 Gene3D - 2 102 IPR036388 -
Mepo3g00215 352 FunFam Caffeic acid 3-O-methyltransferase 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00215 Mepo-Chr3 3069937 3074049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00215 7 352 Monolignol Biosynthesis Gene Families AT5G54160 48.703 4.25e-108 318