Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00208 ATGGGTTCCTATTCAAATGAGAAAGAGAACAATGAAGTGGAAACTATTACTCCACAAATAGATGATAGTGATACCCTCTTAGCCATGGTGCTAGGTGCCAATATGGTGTTTCCTGCAGTTCTTAATGCTGCAATTGAACTCAACTTGTTTGAAATCATTGCTAAGGAAAGTAATGGTGATTTCATGTCAGCCTTTGAAATTGCTTCAAAGCTACCAACGCAACACTCTGACTTGCCAAATAGGCTTGATCGTATGTTGCGCATGCTTGCTAGCTACTCTCTTCTTTCTGTTTCCACTCGCACCAACGACGATGGTAGCACGGTGAGAGTTTATGGAGTCACATCTTCTGGAAAATACTTTGTTAATAATGAAAATGATGGTGGTTATTTGGGCTCATTCACATCATTTATGTGTCACCGTGCTTTGTTAGGGGTGTGGTTGAATTTTAAGGAAGCAGTAATTGATCCAGAGATTGATCTATTCAAGAAAGTTAATGGAATATCAAAGTATGAGTACTTTGGGAAAGATCCACAAATAAACCAGTTATTTAACAAATCAATGACTGATACATGCAATGTTCACATTAAAAGAATCCTTGACATATACAATGGCTTTGAGGGTGTATCAACTTTGGTTGATGTAGGAGGTGGCAATGGACAAACTCTCAAGTTGATTATTGCCAAATACCCATCAATAAAGGCAATCAATTTTGACCTTCCACAAGTGATTGACAATGCATCACCCTTTTCTGGGATTGAATATGTTGGAGGAAGTATGTTTGAGAGTATTCCACAAGGTGATGCCATAATACTTAAGGCCGTATGCCACAACTGGTCAGATGAAAAATGCATAGAAATTTTAAGCAATTGTTACAAAGCTTTACCTCCAAATGGAAAGGTCATTCTCATAGAGCTCACACAACCAGAAGATCCAGAACCAACAAACGCATCTCGAATGATTTCAATTCTCGATAACATCATGTTTATCACAGCTGGTGGAAAAGAAAGAACTCCAAAAGAGTATGAAAATTTGGGTAAACAGTCAGGATTTTCTAAGTTTCGAGTTGCATGTAGTGCTCTCTCCATCATTGGAGTGATGGAACTTTACAAATAA 1113 0.3801 MGSYSNEKENNEVETITPQIDDSDTLLAMVLGANMVFPAVLNAAIELNLFEIIAKESNGDFMSAFEIASKLPTQHSDLPNRLDRMLRMLASYSLLSVSTRTNDDGSTVRVYGVTSSGKYFVNNENDGGYLGSFTSFMCHRALLGVWLNFKEAVIDPEIDLFKKVNGISKYEYFGKDPQINQLFNKSMTDTCNVHIKRILDIYNGFEGVSTLVDVGGGNGQTLKLIIAKYPSIKAINFDLPQVIDNASPFSGIEYVGGSMFESIPQGDAIILKAVCHNWSDEKCIEILSNCYKALPPNGKVILIELTQPEDPEPTNASRMISILDNIMFITAGGKERTPKEYENLGKQSGFSKFRVACSALSIIGVMELYK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00208 370 Pfam O-methyltransferase domain 146 351 IPR001077 GO:0008171
Mepo3g00208 370 FunFam Caffeic acid 3-O-methyltransferase 5 120 - -
Mepo3g00208 370 FunFam Caffeic acid O-methyltransferase 124 370 - -
Mepo3g00208 370 SUPERFAMILY "Winged helix" DNA-binding domain 24 124 IPR036390 -
Mepo3g00208 370 PANTHER O-METHYLTRANSFERASE 29 350 IPR016461 GO:0008168
Mepo3g00208 370 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Mepo3g00208 370 Gene3D Vaccinia Virus protein VP39 123 370 IPR029063 -
Mepo3g00208 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 370 IPR016461 GO:0008168
Mepo3g00208 370 PIRSF O-mtase 5 370 IPR016461 GO:0008168
Mepo3g00208 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 364 IPR029063 -
Mepo3g00208 370 Gene3D - 4 120 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00208 Mepo-Chr3 2969168 2971127 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00208 21 370 Monolignol Biosynthesis Gene Families AT5G54160 46.439 2.72e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00208 - - gmx:100798295 532.717