Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00203 ATGTCAACAACCACCCCTTCCTCCGCCGACACCTCACCACCACCACCCCGTCCCACCATCACCCTCCCACCACGTCCCTCGGTCGAAGCATTCTTCACTTCCAACGCCGTTAGTCCTGGTCCTATGACTCTTGTTTCAAGCTTCTTTGCAACTGAATCCGCCACCTTCTCTCAGCTTCTTGCTGGTGCTATGGCTTCACCTCTTGCTTTCTCTTCATCTTCTTCTTCCCTTGCTGCTAGTGATTATAGTTTTGGTAAAGAGGATGATGGTGGGTCCCTTAATGGTGGGTTTAAACAGAGTAGACCTATGAATTTGGTTATTGCTCGTTCTCCTGTTTTTACTGTTCCTCCTGGTTTGAGTCCTTCTGGTTTTCTTAACTCTCCTGGCTTTTTTTCACCTCAGAGCCCCTTTGGGATGTCACACCAACAGGCTTTAGCTCAGGTTACAGCTCAAGCTGTCCTAGCGCAATCTCATAATATGCACATGCAACCTGAATACCAGCCGGTCTCATATGAAGCCCCCACTGAAAGATTGGTAGAGCAGCCGTCTTATACTCGAAATGAAGCTCCGGAACAGCAAGTGGCAGCACCTGTATCAGAAGCTAGAAATGCTCAAATGGAAACGTCAGAGATTGCACATTCTGATAAGAAATATCAACCATCTTCCCTACCTATTGACAAACCTGCAGATGATGGCTACAACTGGCGTAAGTATGGACAGAAGCAGGTTAAAGGGAGCGAGTATCCACGGAGCTACTACAAATGCACACATCTGAATTGTCCAGTGAAGAAAAAAGTTGAGCGTGCACCTGACGGTCACATAACTGAAATTATCTATAAAGGTCAGCATAACCATGAGAAGCCTCAGGCGAATAGGCGGGTCAAAGAAAACAATAGTGACTTGAATGGAAATGCAAACGTTCAGCCTAAGTCTGACTCAAACTCCCAAGGCTGGTTTGGAAATTCAAACAAAATTAGTGAGAGCGTGCCTGATTCTTCGCCACCAGAGCCTGAGAGTGACCTGACATCCAATCAAGGGGCTATCAGACCACGACCTGGATCAAGTGAGAGTGAGGAAGTCGGTAATGCAGAGAATAAGGAAGAGGGAGTTGACTGTGAGCCAAACCCTAAGAGAAGGAGCACTGAACCGGCGGTTCCTGAAGTACCTCCATCTCAGAAGACTGTCACAGAACCCAAAATTATTGTGCAAACAAGAAGTGAAGTTGATCTTTTGGATGATGGCTACAGATGGAGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAGTGCACTAGTGCAGGCTGCAACGTGCGTAAACATGTTGAGAGAGCATCAACGGACCCAAAAGCTGTCATAACTACATACGAGGGAAAACATAATCATGATGTCCCTGCTGCTAGAAACAGCAGCCACAACACAGCTAATAGCAATTCAATGCCATCAAAACCACAGGCTTTGGTACCAGAGAAGCACCCTTTGCTTAAAGATATGGAGTTTGGAAACAATGACCAAAGACCTGTGCATTTACGCTTGAAAGAAGAGCAAATCATTGTATAA 1578 0.4594 MSTTTPSSADTSPPPPRPTITLPPRPSVEAFFTSNAVSPGPMTLVSSFFATESATFSQLLAGAMASPLAFSSSSSSLAASDYSFGKEDDGGSLNGGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHNMHMQPEYQPVSYEAPTERLVEQPSYTRNEAPEQQVAAPVSEARNAQMETSEIAHSDKKYQPSSLPIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEKPQANRRVKENNSDLNGNANVQPKSDSNSQGWFGNSNKISESVPDSSPPEPESDLTSNQGAIRPRPGSSESEEVGNAENKEEGVDCEPNPKRRSTEPAVPEVPPSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTANSNSMPSKPQALVPEKHPLLKDMEFGNNDQRPVHLRLKEEQIIV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00203 525 MobiDBLite consensus disorder prediction 295 351 - -
Mepo3g00203 525 FunFam WRKY transcription factor 216 289 - -
Mepo3g00203 525 SUPERFAMILY WRKY DNA-binding domain 403 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 MobiDBLite consensus disorder prediction 9 23 - -
Mepo3g00203 525 ProSiteProfiles WRKY domain profile. 406 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 SUPERFAMILY WRKY DNA-binding domain 228 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 Gene3D WRKY domain 221 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 Gene3D WRKY domain 396 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 MobiDBLite consensus disorder prediction 275 396 - -
Mepo3g00203 525 MobiDBLite consensus disorder prediction 473 490 - -
Mepo3g00203 525 Pfam WRKY DNA -binding domain 230 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 Pfam WRKY DNA -binding domain 412 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 MobiDBLite consensus disorder prediction 1 26 - -
Mepo3g00203 525 SMART WRKY_cls 411 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 SMART WRKY_cls 229 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 MobiDBLite consensus disorder prediction 467 492 - -
Mepo3g00203 525 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 127 490 IPR044810 GO:0003700
Mepo3g00203 525 ProSiteProfiles WRKY domain profile. 230 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00203 525 FunFam WRKY transcription factor 33 398 464 - -
Mepo3g00203 525 MobiDBLite consensus disorder prediction 360 380 - -
Mepo3g00203 525 MobiDBLite consensus disorder prediction 207 233 - -
Mepo3g00203 525 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00203 Mepo-Chr3 2922742 2928164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00203 6 523 WRKY Transcription Factor Family AT2G03340 53.028 1.65e-149 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g00203 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00203 - - mtr:11419447 784.637