Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00190 ATGGCAGCATGTGTATACACCGTTTCACAGAACGGAAACGGAGATTTTCAAACGGTGCAAGAAGCAATCGACGCTGTACCACTTGGTAACTCTCGCCGGACTGTCATCCGGGTATCTCCTGGAATCTATAAGCAGCCTCTGTATGTTCCTAAAACGAAGAATTTCATTACTCTTGCTGGGTTGTGTCGTGAGGATACTGTGCTTACTTGGAATAATACTGCTACTAAGATTGATCATCATCAACCTGCTAGGGTGATTGGAACTGGGACGTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATAACTTTTGAGAACTCTGCACCTGAGGGTTCAGGACAGGCAGTTGCAATTAGAGTAACTGCAGATCGATGTGCCTTCTATAATTGTAGGTTCCTTGGATGGCAGGACACACTGTATTTACACTACGGTAAACAATATTTGAAAGATTGCTATGTTGAAGGAAGCGTGGATTTCATCTTTGGCAATAGCACTGCTCTTTTGGAGAACTGTCATATCCACTGCAAGTCTGCAGGGTTCATAACTGCACAGAGTAGAAAATCATCACAGGAAGCAACTGGTTATGTATTCTTGAGATGTGTTATAACAGGTAACGGAGGACATTCATATGCATATCTTGGACGACCGTGGGGACCTTTTGGAAGGGTTGTCTTTGCATACACTTACATGGATCCATGTGTAAGACAAGTTGGCTGGGATAACTGGGGTAAAGTAGAGAATGAGAGGAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCATCAAATCGAGCAAATTGGTGTAGAGAATTGGTGGATGAAGAAGCAGAGCAGTTCATCATGCATCCTTTCATCGATCCAGAACCAGATAGATCTTGGCTTGCTCAAAGAATGGGCTTGAGGATTCCATATTCTGCGTAG 951 0.4364 MAACVYTVSQNGNGDFQTVQEAIDAVPLGNSRRTVIRVSPGIYKQPLYVPKTKNFITLAGLCREDTVLTWNNTATKIDHHQPARVIGTGTFGCGSTIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYVEGSVDFIFGNSTALLENCHIHCKSAGFITAQSRKSSQEATGYVFLRCVITGNGGHSYAYLGRPWGPFGRVVFAYTYMDPCVRQVGWDNWGKVENERSACFYEYRCFGPGCCPSNRANWCRELVDEEAEQFIMHPFIDPEPDRSWLAQRMGLRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00190 316 FunFam Pectinesterase 2 309 - -
Mepo3g00190 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Mepo3g00190 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 304 - -
Mepo3g00190 316 SUPERFAMILY Pectin lyase-like 2 299 IPR011050 -
Mepo3g00190 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Mepo3g00190 316 Gene3D - 4 311 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00190 Mepo-Chr3 2749101 2753575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00190 5 307 Carbohydrate Esterase AT5G47500 38.141 1.23e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00190 K01051 - gmx:100786786 616.69