Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00178 ATGGGGAGATCACCATGTTGTGAAAAAGTTGGTTTAAAGAAAGGACCATGGACACCTGAGGAAGATCAAAAGCTCTTATCTTACATTGAAGAACATGGTCATGGAAGCTGGCGTTCTTTGCCTACAAAAGCTGGACTTGAGAGGTGTGGCAAGAGTTGCAGACTAAGATGGACTAATTATCTAAGGCCTGATATTAAGAGGGGGAAGTTTAGTGTGCAAGAAGAACAAACCATTATTCAACTTCATGCATTTTTAGGCAACAGGTGGTCATCAATAGCCACTCGTTTGCCTAAGAGAACCGATAATGAAATCAAGAACTATTGGAACACACATCTTAAGAAAAGATTAACCAAAATGGGAATTGATCCTGTTACACACAAGCCAAAAAATGAAACCCTTTTTCCTGAAAACAATTCCAAGAATGCTGCAAATCTTAGTCACAAGGCTCAGTGGGAAAGCGCAAGACTTGAAGCTGAAGCAAGATTGGTTAGAGAATCAAAGTTACGTTTACAATTGCAACAGCATCAACTTGGAAGTAATATTTCTCTTTTTCCATCACAACCTTCATCATCTACATCATCATCTTCAAATCAAGTGCTTAGTATTAAAGAAGAAGGTGAGAAAGAGTGGAAAGGTTATGAAGATTCAACACATTTGTTAGAATTCAAAGATTTGATGGAGAATTCATCAATGGCTTTTAGTTCTACATTGCAACATGAGATGACAATGATTAGTGTTGCTGAGGAGGGTTTCACTAATCTCTTGCTAGACAATTCTAACTCCGGTGACCTGAGTTTGTCACCGGAGAGCGGTGGAGAGTGTAATACTTGTGATGGAAGTGGTAGCGGCGGTGGAAGTGATTTCAACGAAGATAACAAGAACTACTGGAACAACATTCTCAATTTAGTTAATTCTTCGCCCTCTGATTCGCCAATGTTCTAA 942 0.3907 MGRSPCCEKVGLKKGPWTPEEDQKLLSYIEEHGHGSWRSLPTKAGLERCGKSCRLRWTNYLRPDIKRGKFSVQEEQTIIQLHAFLGNRWSSIATRLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNETLFPENNSKNAANLSHKAQWESARLEAEARLVRESKLRLQLQQHQLGSNISLFPSQPSSSTSSSSNQVLSIKEEGEKEWKGYEDSTHLLEFKDLMENSSMAFSSTLQHEMTMISVAEEGFTNLLLDNSNSGDLSLSPESGGECNTCDGSGSGGGSDFNEDNKNYWNNILNLVNSSPSDSPMF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00178 313 CDD SANT 69 112 IPR001005 -
Mepo3g00178 313 CDD SANT 16 61 IPR001005 -
Mepo3g00178 313 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo3g00178 313 FunFam MYB transcription factor 68 129 - -
Mepo3g00178 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 234 - -
Mepo3g00178 313 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo3g00178 313 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo3g00178 313 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo3g00178 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo3g00178 313 MobiDBLite consensus disorder prediction 181 203 - -
Mepo3g00178 313 Gene3D - 68 149 - -
Mepo3g00178 313 FunFam MYB-related transcription factor 13 66 - -
Mepo3g00178 313 SMART sant 66 114 IPR001005 -
Mepo3g00178 313 SMART sant 13 63 IPR001005 -
Mepo3g00178 313 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo3g00178 313 MobiDBLite consensus disorder prediction 181 201 - -
Mepo3g00178 313 Gene3D - 13 66 - -
Mepo3g00178 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00178 Mepo-Chr3 2581777 2584185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00178 1 313 MYB Transcription Factor Family AT3G01140 56.497 4.14e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g00178 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00178 K09422 - fve:101311397 362.844