Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00177 ATGGAAAATGAAAAGGTCAAATTTGATGCTGGTTTTCGATTCTTTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTACCAGAGATGGCTAAAATGGGAGAAACAGAATGGTATTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTCAAAGGACTAATAGAGCTACTCATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTACAAGGGAAATTCATTAATTGGGATGAAAAAAACATTGGTTTTCTACATAGGAAGAGCTCCGACAGGTGAAAAGAGCAATTGGGTCATGCATGAATACCGATTGGAGGGTAACTCACTCTCTAAGCACAACCTTTTTCCTGAGCACAACCTATCCACGCATAGAATGAGTGAATGGGTTCTCACTAGAGTCTTTGAGAAGCGTAATTGTGGAAAGAAAATGGATGGCTCAAAACTTAGAAGGTCTAACTCCCATAGAGAAGGACCTTCAAATACTAATGCATCTCTAATGCCTCCATTGTTTGATTCTTCTCCATACATTAGTGAAGACCAAACCATTATTTCTGATTTCTCAAATGTGTTCAATTCATTCTTCAATCCAAATCAAACAGAGAAACCGAAAACACAAGATGACAACATTGTTCATAACAATGAAACTAGTATCTTGAACATTTCTTCCTCTTCAAAACAAATGGATGTTTACCCTTTAGGTGAAGCAACAATGGCTGATTCCAACCAAACCTCAATGGTCGAGAATTCATCAAACTTTTTCTTCTCCCAAGAGTTTTCTTTTGGGAGAGACTTTGATGCTGATGCTGATGCTGATATCTCATCTGTGGTATATGGAAATGACATGTTTCAAAGGTGGTCTGTGAATCAAGATTTGTCACCAGCTTCTACTGGACTTGCAGCCAATCATAACTTTTGGAATTTCTGA 1011 0.3818 MENEKVKFDAGFRFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKCEPWDLPEMAKMGETEWYFFCVRDRKYPTGQRTNRATHAGYWKATGKDKEIYKGNSLIGMKKTLVFYIGRAPTGEKSNWVMHEYRLEGNSLSKHNLFPEHNLSTHRMSEWVLTRVFEKRNCGKKMDGSKLRRSNSHREGPSNTNASLMPPLFDSSPYISEDQTIISDFSNVFNSFFNPNQTEKPKTQDDNIVHNNETSILNISSSSKQMDVYPLGEATMADSNQTSMVENSSNFFFSQEFSFGRDFDADADADISSVVYGNDMFQRWSVNQDLSPASTGLAANHNFWNF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00177 336 FunFam NAC domain-containing protein 100-like 17 169 - -
Mepo3g00177 336 ProSiteProfiles NAC domain profile. 8 165 IPR003441 GO:0003677|GO:0006355
Mepo3g00177 336 Gene3D NAC domain 17 169 IPR036093 GO:0003677|GO:0006355
Mepo3g00177 336 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
Mepo3g00177 336 MobiDBLite consensus disorder prediction 170 197 - -
Mepo3g00177 336 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Mepo3g00177 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00177 Mepo-Chr3 2537751 2539723 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00177 8 336 NAC Transcription Factor Family AT5G07680 45.748 1.10e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g00177 NAM 8.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00177 - - cam:101488836 392.889