Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00175 ATGGAAAATGAAAAGGTCAAATTTCCCGCTGGTTGGGGATTCTTTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTTAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGAGATGGCTAAAATGGGAGAAACAAAATGGTATTTTTTCAGTGTGAGGGACAGAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTCATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTACAAGGGAAATTCATTAATTGGGATGAAAAAAACACTGGTTTTCTACATAGGAAGAGCTCCGAGCGGTGAAAAAACCAACTGGGTCATGCACGAATACCGATTGGAGGGTAACTCACTCTCTGAGCACAGCCTATCCACGCACCGAATGAGTGAATGGGTTCTCACTAGAGTCTTTGAGAAGCGCAATTCTGGAAAGAAAATGGATGGTTCAAAACTTGGAAGGTCTAACTCCTCTCGAGAAGGACCTTCAAATACTAATGCATCTCTATTGCCTCCATTGTTGGATTCTTCTCCATACAATGGTGAAGACCAAAACACTATTTCTGATTTCTCAAATGTGTTCAATTCATTATCCAATTCAAATCAAACAGAGAAACCAAAAACACAAGATGACAACATTGTTCATAACAATGAAACTAGTATCTTGAACATTTCTTCCTCTTCAAAACAAATGGATGTTTACCCTTTAGCTGAAGCAACAATTGTTGATTCCAACCAAACCTCAACGGTCGGGAATTCATCAAACTTTTTCTTCTCCCAAGATTTTTCTTTTGGGAGAGACATTGATGCTGATATCTCATCTGTGGTATACATAAATGACATGTTTCAAAGGTGGTCTGTGAATCAAGATTTGTCACCAGCTTCTACTGGACTTGCAGCCAATCATAGCTTTTGGAATTTTTAA 981 0.3894 MENEKVKFPAGWGFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKCEPWDLPEMAKMGETKWYFFSVRDRKYPTGQRTNRATHAGYWKATGKDKEIYKGNSLIGMKKTLVFYIGRAPSGEKTNWVMHEYRLEGNSLSEHSLSTHRMSEWVLTRVFEKRNSGKKMDGSKLGRSNSSREGPSNTNASLLPPLLDSSPYNGEDQNTISDFSNVFNSLSNSNQTEKPKTQDDNIVHNNETSILNISSSSKQMDVYPLAEATIVDSNQTSTVGNSSNFFFSQDFSFGRDIDADISSVVYINDMFQRWSVNQDLSPASTGLAANHSFWNF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00175 326 MobiDBLite consensus disorder prediction 162 230 - -
Mepo3g00175 326 FunFam NAC domain-containing protein 100-like 17 163 - -
Mepo3g00175 326 MobiDBLite consensus disorder prediction 168 230 - -
Mepo3g00175 326 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Mepo3g00175 326 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 244 - -
Mepo3g00175 326 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Mepo3g00175 326 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Mepo3g00175 326 Pfam No apical meristem (NAM) protein 9 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00175 Mepo-Chr3 2519380 2521749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00175 8 247 NAC Transcription Factor Family AT5G07680 55.159 8.48e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g00175 NAM 4.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00175 - - cam:101488836 398.282