Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00147 ATGATGGAGGGAATAGACAGATCAAGATCAACAAGCCGTTTGGTCACTTTTACAAATGAGCTGCAAAATCGCATAACTCAAAAGCAATCAATGTACCCTCTTGGCTTCCCAAAAAAGGTATTTGCTGAGGTTATAGGGACATATTTATTGGTATTTGTTGGGAGTGGGGCTGCTGCTATGAATTCAATTGATGAAAACAAAGTCTCAAAATTGGGAGCTTCACTTGCAGGTGGATTCATTGTTACTGTTATGATTTATGCTATTGGACACATCTCTGGTGCACACATGAATCCGGCTGTTTCCTTAGCTTTTGCCACCGTTAAGCATTTTCCTTGGAAACAGGTCCCATTTTACATTGCAGCTCAACTCACAGGAGCAATTTCAGCTTCATATACACTTCGAGTTTTGTTAGAGCCATCAAAGCAGCTAGGGGCAACATCACCTTCTGGATCAAACATTCAAGCCCTAATCATAGAAATTGTGACCACCTTCACCATGGTGTTCATCTCCACCGCCGTTGCCACCGACTCAAAAGCTACAGGAGAGCTTGCTGGAGTAGCAGTAGGTTCATCTGTTAGCATAGCAAGCATTGTTGCTGGACCAATATCAGGTGGGTCAATGAATCCAGCAAGGACATTAGGTCCTGCAATTGCTACTTCATCCTACAAAGGAATTTGGATCTATATGGTTGGACCAATTACAGGTGCACTTTTAGGTGCATGGTCTTATGTTGTGATTCAAGAAACAGATCATAAACAAGATCTTGCAACTTCACAATCTCCTCTTTCAGTCAAGATACACGATAAAATGAGTGGGATTGAGCTATAA 828 0.4179 MMEGIDRSRSTSRLVTFTNELQNRITQKQSMYPLGFPKKVFAEVIGTYLLVFVGSGAAAMNSIDENKVSKLGASLAGGFIVTVMIYAIGHISGAHMNPAVSLAFATVKHFPWKQVPFYIAAQLTGAISASYTLRVLLEPSKQLGATSPSGSNIQALIIEIVTTFTMVFISTAVATDSKATGELAGVAVGSSVSIASIVAGPISGGSMNPARTLGPAIATSSYKGIWIYMVGPITGALLGAWSYVVIQETDHKQDLATSQSPLSVKIHDKMSGIEL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00147 275 Pfam Major intrinsic protein 36 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g00147 275 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g00147 275 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g00147 275 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g00147 275 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g00147 275 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g00147 275 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g00147 275 CDD MIP 38 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g00147 275 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Mepo3g00147 275 PANTHER AQUAPORIN NIP2-1 30 252 IPR034294 -
Mepo3g00147 275 Gene3D Glycerol uptake facilitator protein. 6 259 IPR023271 -
Mepo3g00147 275 SUPERFAMILY Aquaporin-like 31 253 IPR023271 -
Mepo3g00147 275 NCBIfam MIP family channel protein 42 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00147 Mepo-Chr3 2204604 2211506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00147 38 271 Major Intrinsic Protein MIP AT5G37820 48.945 1.04e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00147 K09874 - gmx:100788071 342.043