Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00120 ATGTCAAAAATGTCGAGTCCTAGCAGTTCAGAGATTGAAGAGAAAAGAGTTACTTCAATTATCCATGAAGTTGTTGAAGTTGATTGCTCTACTGAACAAGAGGTTACAAAGGAAGACAAACCAAAATGTGCTAAAGAGGAGATGGGTGAGGTAAAAGAAGAAAACGAAAGATTGAAGACGATGCTATCTCGAGTTGAAAAAGATTACAACTCGCTTCAGCTCCGTTTCTTTGACATCGTTAACAAAGACGTTTCTATGAAAGATATAGAAGATTCATCGACTTCACACGAAGAAATCGATGAAGAACCTGAGTTTGTTTCACTTTGCCTTGGAAGAAGTCCAAATGAGTATAAGAAAGAAGCAAAAAACATTGAAAACCCTAACAAACCTAAAGAGAAAGAAGATATGGAAGTTAACCTAAGTCTTGGATTAGACTCTAAATATATGTTACCAACGGAGTTAGTATCTGATTTGAGTCCAATGAATAGCTCAGAAGAATTACCAAAGGAAGTTGAAGTTGAAGAAAAAGGAGCAATATTTTCAACAAATAAATCAACAAAAGTTATAAATGTAAATGATGAGATTTCAGAACTATTGCCTGCTAAAAGAGTCAGAGTTTCTGTGAGAGCTAAATGTGATACTCCCACGATGAATGATGGATGTCAATGGAGGAAATATGGACAAAAGATAGCAAAGGGAAATCCATGTCCAAGAGCATACTATCGTTGTACAGTTGCACCAGCATGCCCAGTTAGGAAACAGGTCCAAAGATGTGCTGATGACATGTCCATCTTAATCACAACATATGAAGGAACACACAACCACCCTCTTCAAGTAACAGCATCAGCCATGGCATACACAACATCAGCTGCAGCTTCAATGATGGTATCAGGTTCATCAACATCATCATCATCATCACATCAAAATCAAAATGTTCATCACAACAATTCCACATCTTTTGGAAATTCACCAACTCAACTCAATGGTCTAAATTTCAATCATCACCAATTTGAACAATCAAGAACACCAAAACAACATTTCTTCATTCCACCAAACCATAATAACTTGTTTCCAACAATCACTCTTGACCTAACTTCTCCTTCATCCTTATCATCATCAAACATTGCTTCAAATGTTCCAAGATTTTCTCCAAATAATCTTAGTTTTTGTTCCACACAACAACCAAATTTCACACCAATATCATCCATTTGGAACAACAATAATAACAATAAATTAGGGTTTATTAACAATAACACAAACCCTAATATTGAAAAAACTCAAGTTAGGCCTTTTAATCATTTCCAAGAAAATTTCTATCAAAATCAAAATTGCATGACAAGTTATCAAACCCCTTCAAGACAAGCTTTGGCTGAAACAATAAGCAAAGCAATTAGCACTGATCCAAGTCTTCATTCAGTTATAGCTGCTGCAGTTTCGTCGATTGTAGGACAAGGATCAAACAATGGTGGAAAGCAAGAAGAAAATAGAGAGAATGGTTTAGGTGCAGGGTTGAATTTGAAACTTGGTGAGTATCCTCAATTGGTTTCAAACAATTTGTTGAATCAAAATGGTAAAGGATGCTTGAAGGGATCATACTTCAAAAGATTGTCACCAACAACAAGTTCACAAGCTAAAAATTTCATGCTTCTTCAACCTTCATTGCCATTTTCTGTTTCTAAGAGCAGTGCTAGTAAACCTCCATCCATTGTTAACAATATCAACAATTTTGATCTAGATAAGAACAAACATAATTAG 1755 0.3533 MSKMSSPSSSEIEEKRVTSIIHEVVEVDCSTEQEVTKEDKPKCAKEEMGEVKEENERLKTMLSRVEKDYNSLQLRFFDIVNKDVSMKDIEDSSTSHEEIDEEPEFVSLCLGRSPNEYKKEAKNIENPNKPKEKEDMEVNLSLGLDSKYMLPTELVSDLSPMNSSEELPKEVEVEEKGAIFSTNKSTKVINVNDEISELLPAKRVRVSVRAKCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDMSILITTYEGTHNHPLQVTASAMAYTTSAAASMMVSGSSTSSSSSHQNQNVHHNNSTSFGNSPTQLNGLNFNHHQFEQSRTPKQHFFIPPNHNNLFPTITLDLTSPSSLSSSNIASNVPRFSPNNLSFCSTQQPNFTPISSIWNNNNNNKLGFINNNTNPNIEKTQVRPFNHFQENFYQNQNCMTSYQTPSRQALAETISKAISTDPSLHSVIAAAVSSIVGQGSNNGGKQEENRENGLGAGLNLKLGEYPQLVSNNLLNQNGKGCLKGSYFKRLSPTTSSQAKNFMLLQPSLPFSVSKSSASKPPSIVNNINNFDLDKNKHN 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00120 584 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 25 491 IPR044810 GO:0003700
Mepo3g00120 584 Coils Coil 48 75 - -
Mepo3g00120 584 FunFam probable WRKY transcription factor 31 202 279 - -
Mepo3g00120 584 SMART WRKY_cls 217 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00120 584 Pfam WRKY DNA -binding domain 218 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00120 584 MobiDBLite consensus disorder prediction 297 330 - -
Mepo3g00120 584 SUPERFAMILY WRKY DNA-binding domain 211 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g00120 584 ProSiteProfiles WRKY domain profile. 212 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00120 584 Gene3D WRKY domain 202 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00120 Mepo-Chr3 1609735 1613458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00120 48 560 WRKY Transcription Factor Family AT5G15130 38.739 1.51e-80 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g00120 WRKY 4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00120 - - psat:127130037 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00120 3 1609735 1613458 Mepo3g00120 3 1609735 1613458 ECH
Mepo3g00120 3 1609735 1613458 Mepo1g01284 1 12656718 12661263 ECH